RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
CT55-202ENST00000344129 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 COLGALT1Q8NBJ5 622 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 COG1Q8WTW3 980 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 STK32AQ8WU08 396 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 NDRG1Q92597 394 aaKnown RBP13.37□□□□□ -0.27
CT55-202ENST00000344129 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
CT55-202ENST00000344129 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 WDR35Q9P2L0 1181 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
CT55-202ENST00000344129 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SIGLEC16A6NMB1 481 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 PROSCO94903 275 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 GJB5O95377 273 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 RFC1P35251 1148 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 GSCP56915 257 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 ADIGQ0VDE8 80 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 GPRIN1Q7Z2K8 1008 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SPATA2LQ8IUW3 424 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 ZMIZ2Q8NF64 920 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SMARCD1Q96GM5 515 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 PGLYRP2Q96PD5 576 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 SMARCAL1Q9NZC9 954 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 EHD2Q9NZN4 543 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 C2CD2LO14523 706 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 KCNK3O14649 394 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 LAG3P18627 525 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 CYP2F1P24903 491 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 NDUFV1P49821 464 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SLC6A3Q01959 620 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 HERVK_113Q902F9 699 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 KRT35Q92764 455 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
CT55-202ENST00000344129 CARD6Q9BX69 1037 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
CT55-202ENST00000344129 NLRC5Q86WI3 1866 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 EFEMP2O95967 443 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 RPL17P18621 184 aaKnown RBP13.35□□□□□ -0.27
CT55-202ENST00000344129 PSMA2P25787 234 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 ACADSBP45954 432 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
CT55-202ENST00000344129 SNX16P57768 344 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 TAP1Q03518 808 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 HERC6Q8IVU3 1022 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 SPG21Q9NZD8 308 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
CT55-202ENST00000344129 OR6C75A6NL08 312 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 HHLA1C9JL84 531 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 F8VP50 259 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 H7C4K7 107 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 CPB1P15086 417 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 ATP2A2P16615 1042 aaKnown RBP13.34□□□□□ -0.27
CT55-202ENST00000344129 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
CT55-202ENST00000344129 GJC1P36383 396 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 TKTL1P51854 596 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
CT55-202ENST00000344129 KIAA1841Q6NSI8 718 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 TRNP1Q6NT89 227 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 ANKS3Q6ZW76 656 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 SCN4BQ8IWT1 228 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 SIX6OS1Q8N1H7 587 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 KCTD13Q8WZ19 329 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 ALG3Q92685 438 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
CT55-202ENST00000344129 CD101Q93033 1021 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 CDY1Q9Y6F8 540 aa13.34□□□□□ -0.27
CT55-202ENST00000344129 LCHNA4D1U4 455 aa13.33□□□□□ -0.27
CT55-202ENST00000344129 PDE2AO00408 941 aaPredicted RBP13.33□□□□□ -0.27
CT55-202ENST00000344129 ADAM12O43184 909 aa13.33□□□□□ -0.27
CT55-202ENST00000344129 TBC1D4O60343 1298 aa13.33□□□□□ -0.27
CT55-202ENST00000344129 SLU7O95391 586 aaKnown RBP13.33□□□□□ -0.27
CT55-202ENST00000344129 TCF4P15884 667 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms