RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MKNK1Q9BUB5 465 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MAK16Q9BXY0 300 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 NMUR2Q9GZQ4 415 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 GID8Q9NWU2 228 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 QPCTLQ9NXS2 382 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CARD8Q9Y2G2 431 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PCDHA2Q9Y5H9 948 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 HEY1Q9Y5J3 304 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SF3B1O75533 1304 aaKnown RBP eCLIP8.48□□□□□ -1.053e-8■■■■■ 315.9
ATG4A-201ENST00000343524 SPDYE16A6NNV3 312 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 FOXO6A8MYZ6 492 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 H0YJX3 145 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 IRS4O14654 1257 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 C8BP07358 591 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SERPINA6P08185 405 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 GZMAP12544 262 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 AOC1P19801 751 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 GCAP28676 217 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PRDX6P30041 224 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TTKP33981 857 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ALDH1A3P47895 512 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MARCKSL1P49006 195 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PCYT1AP49585 367 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CABP4P57796 275 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ESRRGP62508 458 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 OVGP1Q12889 678 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 NFIL3Q16649 462 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 BMT2Q1RMZ1 405 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 LPCAT4Q643R3 524 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 AADACL2Q6P093 401 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PRPF39Q86UA1 669 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ZDHHC14Q8IZN3 488 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 CCDC33Q8N5R6 958 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TRIML2Q8N7C3 387 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MIGA1Q8NAN2 632 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MINDY2Q8NBR6 621 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PNMA1Q8ND90 353 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ADCY4Q8NFM4 1077 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 OLIG1Q8TAK6 271 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 TBCKQ8TEA7 893 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SDR42E1Q8WUS8 393 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 APBB2Q92870 758 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PPP1R10Q96QC0 940 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 GPATCH1Q9BRR8 931 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 DCLK3Q9C098 648 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 VPS37BQ9H9H4 285 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 KCNK13Q9HB14 408 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 MKNK2Q9HBH9 465 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 SAYSD1Q9NPB0 183 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PPARGC1AQ9UBK2 798 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 APEX2Q9UBZ4 518 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 DNAJC12Q9UKB3 198 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 ABT1Q9ULW3 272 aaKnown RBP8.48□□□□□ -1.05
ATG4A-201ENST00000343524 PSMD13Q9UNM6 376 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 B3GNT3Q9Y2A9 372 aa8.48□□□□□ -1.05
ATG4A-201ENST00000343524 NFKBIEO00221 500 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 KLHL2O95198 593 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 GYS1P13807 737 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 RAG1P15918 1043 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 PCSK6P29122 969 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CCR3P51677 355 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 C21orf59P57076 290 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 RPS3AP61247 264 aaKnown RBP8.47□□□□□ -1.05
ATG4A-201ENST00000343524 KCNC4Q03721 635 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 BTKQ06187 659 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 TRPC3Q13507 836 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 NCOA4Q13772 614 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 MORF4L2Q15014 288 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 TLR1Q15399 786 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 TGFBIQ15582 683 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CCNG2Q16589 344 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 RABGAP1LQ5R372 815 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 TPTE2Q6XPS3 522 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 DCDC5Q6ZRR9 648 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 RFX8Q6ZV50 586 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 FRA10AC1Q70Z53 315 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 DNAAF5Q86Y56 855 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-201ENST00000343524 ACTRT2Q8TDY3 377 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 PYDC1Q8WXC3 89 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 APOPT1Q96IL0 206 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 KCNK16Q96T55 309 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 PRPF18Q99633 342 aaKnown RBP8.47□□□□□ -1.05
ATG4A-201ENST00000343524 SH3GL1Q99961 368 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 TPK1Q9H3S4 243 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 GTF3C4Q9UKN8 822 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 ADAMTS6Q9UKP5 1117 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 ITGA11Q9UKX5 1188 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CNOT11Q9UKZ1 510 aaKnown RBP8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CDH7Q9ULB5 785 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 CCPG1Q9ULG6 757 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms