RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 BCCIPQ9P287 314 aaKnown RBP eCLIP17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 GTF3C4Q9UKN8 822 aa17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 L1RE1Q9UN81 338 aa17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
NECTIN1-202ENST00000340882 URB1O60287 2271 aaKnown RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 TCRBV21S2A2A0A5A6 115 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 LEFTY2O00292 366 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 GFPT1Q06210 699 aaPredicted RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 SPDYCQ5MJ68 293 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 CCNI2Q6ZMN8 369 aaPredicted RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 PGBD3Q8N328 593 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 REEP2Q9BRK0 252 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 ASB7Q9H672 318 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 POLMQ9NP87 494 aaPredicted RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 LARSQ9P2J5 1176 aaKnown RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 RAXQ9Y2V3 346 aa17.58■□□□□ 0.4
NECTIN1-202ENST00000340882 H0YCG3 227 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 K7ENM7 598 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 ARHGAP33O14559 1287 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 GJB3O75712 270 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 KAT7O95251 611 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 FTH1P19P0C7X4 201 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 RDXP35241 583 aaKnown RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 ANAPC15P60006 121 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 USP46P62068 366 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 ATP2C1P98194 919 aaPredicted RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 KDSRQ06136 332 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 KCNB1Q14721 858 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 DHCR24Q15392 516 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 TRIP6Q15654 476 aaKnown RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 SV2CQ496J9 727 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 INTS6LQ5JSJ4 861 aaKnown RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 DTHD1Q6ZMT9 781 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 SLC41A1Q8IVJ1 513 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 SCN4BQ8IWT1 228 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 ADAMTS14Q8WXS8 1223 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 LRIG1Q96JA1 1093 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 FIZ1Q96SL8 496 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 PNKPQ96T60 521 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 RNF38Q9H0F5 515 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 CCDC86Q9H6F5 360 aaKnown RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 ABCB6Q9NP58 842 aa17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
NECTIN1-202ENST00000340882 A0A0A0MRY4 1105 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 HOXD12P35452 270 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 PRPHP41219 470 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 RPL6Q02878 288 aaKnown RBP17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 ZNF33AQ06730 810 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 RHBDF2Q6PJF5 856 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 SLCO6A1Q86UG4 719 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 PHTF2Q8N3S3 785 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 CEP76Q8TAP6 659 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 CRELD1Q96HD1 420 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 ACBD6Q9BR61 282 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 DNAAF2Q9NVR5 837 aaKnown RBP17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 HCN2Q9UL51 889 aa17.56■□□□□ 0.4
NECTIN1-202ENST00000340882 MYMKA6NI61 221 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 ATP2C2O75185 946 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 GABRG2P18507 467 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 NEK4P51957 841 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 GNL2Q13823 731 aaKnown RBP17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 TMEM119Q4V9L6 283 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 EOGTQ5NDL2 527 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 LMBRD2Q68DH5 695 aaPredicted RBP17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 ADALQ6DHV7 355 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 MYCT1Q8N699 235 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 SPATA18Q8TC71 538 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 ERLEC1Q96DZ1 483 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 KCND2Q9NZV8 630 aa17.55■□□□□ 0.4
NECTIN1-202ENST00000340882 GOLGA4Q13439 2230 aaKnown RBP17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 AP5Z1O43299 807 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 APODP05090 189 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 DPP6P42658 865 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 ZNF131P52739 623 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 MARCH9Q86YJ5 346 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 FSIP1Q8NA03 581 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 CXorf38Q8TB03 319 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 ADAM32Q8TC27 787 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 CD93Q9NPY3 652 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 ARHGEF4Q9NR80 690 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 SMPD4Q9NXE4 827 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 CALCOCO1Q9P1Z2 691 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 AGO2Q9UKV8 859 aaKnown RBP17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 ODF2LQ9ULJ1 636 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 AGAP1Q9UPQ3 857 aa17.54■□□□□ 0.4
NECTIN1-202ENST00000340882 IGHV1OR15-9A0A0B4J2B8 117 aa17.53■□□□□ 0.4
NECTIN1-202ENST00000340882 TRAK2O60296 914 aa17.53■□□□□ 0.4
NECTIN1-202ENST00000340882 GTF2BQ00403 316 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms