RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 UNC93AQ86WB7 457 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
VAPA-201ENST00000340541 CRYBG2Q8N1P7 616 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ZSCAN18Q8TBC5 510 aaPredicted RBP16.38■□□□□ 0.21
VAPA-201ENST00000340541 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 TRMT2BQ96GJ1 504 aaKnown RBP16.38■□□□□ 0.21
VAPA-201ENST00000340541 SPATA17Q96L03 361 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 GPR88Q9GZN0 384 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ATXN3LQ9H3M9 355 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ZFP14Q9HCL3 533 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 LTB4R2Q9NPC1 389 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 R4GN57 208 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CACNA1IQ9P0X4 2223 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 MIA3Q5JRA6 1907 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 ZNF638Q14966 1978 aaKnown RBP16.37■□□□□ 0.21
VAPA-201ENST00000340541 CDC25CP30307 473 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 VIPR2P41587 438 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 FMO5P49326 533 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 DPCR1Q3MIW9 517 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 FUKQ8N0W3 1084 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 MLKLQ8NB16 471 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 RUBCNQ92622 972 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 TATDN2Q93075 761 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 FAXDC2Q96IV6 333 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 TNIP3Q96KP6 325 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 C8orf48Q96LL4 319 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 CEP295NLQ96MC4 621 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 ARID3AQ99856 593 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
VAPA-201ENST00000340541 ELOVL4Q9GZR5 314 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 MTF2Q9Y483 593 aaPredicted RBP16.37■□□□□ 0.21
VAPA-201ENST00000340541 EP300Q09472 2414 aaPredicted RBP16.37■□□□□ 0.21
VAPA-201ENST00000340541 ANAPC1Q9H1A4 1944 aa16.37■□□□□ 0.21
VAPA-201ENST00000340541 F8VP50 259 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 MAN2B1O00754 1011 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 PMM2O15305 246 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 CILPO75339 1184 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 GNA14O95837 355 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 WEE1P30291 646 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 GRIK1P39086 918 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 USP46P62068 366 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 TAF12Q16514 161 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 GPR158Q5T848 1215 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 VITQ6UXI7 678 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 FAM35AQ86V20 835 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 CCDC150Q8NCX0 1101 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 E2F7Q96AV8 911 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 SLC46A2Q9BY10 475 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 SLITRK6Q9H5Y7 841 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 TASP1Q9H6P5 420 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 SPATA6Q9NWH7 488 aaPredicted RBP16.36■□□□□ 0.21
VAPA-201ENST00000340541 MAGED2Q9UNF1 606 aaPredicted RBP16.36■□□□□ 0.21
VAPA-201ENST00000340541 PCDHGA2Q9Y5H1 932 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 COL4A2P08572 1712 aa16.36■□□□□ 0.21
VAPA-201ENST00000340541 COL4A3Q01955 1670 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 TRIM66O15016 1216 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 PRAMEF12O95522 483 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 CCDC130P13994 396 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 CD58P19256 250 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
VAPA-201ENST00000340541 ARHGAP15Q53QZ3 475 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
VAPA-201ENST00000340541 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
VAPA-201ENST00000340541 C12orf29Q8N999 325 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 SUMF1Q8NBK3 374 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 NELL1Q92832 810 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 IRF7Q92985 503 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 LRRC3BQ96PB8 259 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 TRMT61BQ9BVS5 477 aaKnown RBP16.35■□□□□ 0.21
VAPA-201ENST00000340541 TTLL2Q9BWV7 592 aa16.35■□□□□ 0.21
VAPA-201ENST00000340541 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
VAPA-201ENST00000340541 PATJQ8NI35 1801 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 KIF26AQ9ULI4 1882 aaPredicted RBP16.34■□□□□ 0.21
VAPA-201ENST00000340541 PSMC3P17980 439 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 GRM2Q14416 872 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 WDR44Q5JSH3 913 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
VAPA-201ENST00000340541 ZBTB44Q8NCP5 570 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 ZMIZ2Q8NF64 920 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 SLC2A14Q8TDB8 520 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 DEPDC1BQ8WUY9 529 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 GCNAQ96QF7 691 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 KCNK16Q96T55 309 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 HEBP1Q9NRV9 189 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms