RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 TTC7BQ86TV6 843 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PPP4R1Q8TF05 950 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PWWP2AQ96N64 755 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 KCTD10Q9H3F6 313 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 KCNK9Q9NPC2 374 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 FBXO6Q9NRD1 293 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-202ENST00000339438 DMTF1Q9Y222 760 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 IGLV3-22A0A075B6J6 115 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-202ENST00000339438 H3BNX3 289 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 CAPNS1P04632 268 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 UCHL3P15374 230 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 SLC9A1P19634 815 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 CCR3P51677 355 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PDE1BQ01064 536 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 SPIRE1Q08AE8 756 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 IKQ13123 557 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-202ENST00000339438 NCOA4Q13772 614 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 GK3PQ14409 553 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 LPIN1Q14693 890 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 KIF22Q14807 665 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PDK3Q15120 406 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 TCEAL1Q15170 157 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 ASIC2Q16515 512 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC137Q6PK04 289 aaKnown RBP5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PPP1R21Q6ZMI0 780 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 SRRM1Q8IYB3 904 aaKnown RBP5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PPFIBP2Q8ND30 876 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 NSL1Q96IY1 281 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 CLPTM1LQ96KA5 538 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 HGH1Q9BTY7 390 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 ELP3Q9H9T3 547 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PCDHA6Q9UN73 950 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 PCDHA8Q9Y5H6 950 aa5.86□□□□□ -1.47
CSDE1-202ENST00000339438 C15orf38-AP3S2A0A0A6YYH1 394 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 PVALEFA0A1B0GWK0 134 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 DHX15O43143 795 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TRMUO75648 421 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ZWINTO95229 277 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 GABRB3P28472 473 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 LBX1P52954 281 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TNFAIP1Q13829 316 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 KYNUQ16719 465 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 INF2Q27J81 1249 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ANKRD20A4Q4UJ75 823 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 LPCAT4Q643R3 524 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 SNRNP48Q6IEG0 339 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 DTHD1Q6ZMT9 781 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 EPM2AIP1Q7L775 607 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ARPINQ7Z6K5 226 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 DGKHQ86XP1 1220 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 IQCF2Q8IXL9 164 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 SYCE1Q8N0S2 351 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 MZB1Q8WU39 189 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 PTCD2Q8WV60 388 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 LPAR1Q92633 364 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF75CPQ92670 426 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 DNAJC19Q96DA6 116 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ITPKCQ96DU7 683 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 EGLN2Q96KS0 407 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 PLK2Q9NYY3 685 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 WHRNQ9P202 907 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 PARP2Q9UGN5 583 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 A0A1B0GTW7 788 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TTLL13PA6NNM8 815 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 KLRF2D3W0D1 207 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 H3BSA7 217 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TM7SF2O76062 418 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TROVE2P10155 538 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 EEF2P13639 858 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ANXA13P27216 316 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 COILP38432 576 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 IL9RQ01113 521 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 BTKQ06187 659 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 GRM4Q14833 912 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 SUPT20HL1Q3ZLR7 823 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 CATIPQ7Z7H3 387 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 LRRC6Q86X45 466 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 PASD1Q8IV76 773 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 BIRC8Q96P09 236 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 WRNIP1Q96S55 665 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ZSCAN10Q96SZ4 725 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 BHMT2Q9H2M3 363 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF696Q9H7X3 374 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 TUBA8Q9NY65 449 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 AMFRQ9UKV5 643 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF711Q9Y462 761 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC162PA2VCL2 907 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 GYG2O15488 501 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 DNAJA2O60884 412 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 STK10O94804 968 aaKnown RBP5.85□□□□□ -1.47
CSDE1-202ENST00000339438 SCG2P13521 617 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ADSSP30520 456 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 BMP8BP34820 402 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 CLCN2P51788 898 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 NAA20P61599 178 aa5.85□□□□□ -1.47
CSDE1-202ENST00000339438 ASIC1P78348 528 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms