RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PTPN14Q15678 1187 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 C3orf20Q8ND61 904 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 C17orf80Q9BSJ5 609 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 LCMT1Q9UIC8 334 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 TRIM66O15016 1216 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MTA2O94776 668 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MYOGP15173 224 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 RRM1P23921 792 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 OR1D2P34982 312 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SCNN1AP37088 669 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MAP3K7CLP57077 242 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ZNF268Q14587 947 aaPredicted RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 PLEKHA7Q6IQ23 1121 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 PDE12Q6L8Q7 609 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ALS2CR12Q96Q35 445 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SMOQ99835 787 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 CLSTN3Q9BQT9 956 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 NGRNQ9NPE2 291 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 CTTNBP2NLQ9P2B4 639 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ZNF638Q14966 1978 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MYO9BQ13459 2157 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MTCL1Q9Y4B5 1905 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MACROD2A1Z1Q3 448 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 MTMR11A4FU01 709 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 E5RJQ4 531 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SART1O43290 800 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 LILRB3O75022 631 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 FBXO21O94952 628 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ARPP19P56211 112 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 RAB33AQ14088 237 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 DNAJC24Q6P3W2 148 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 RSPO2Q6UXX9 243 aaPredicted RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 NYAP1Q6ZVC0 841 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TMC7Q7Z402 723 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SIX6OS1Q8N1H7 587 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TRIM58Q8NG06 486 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 SLC35G2Q8TBE7 412 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 C8orf48Q96LL4 319 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TCF25Q9BQ70 676 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 PBX4Q9BYU1 374 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 ENTPD7Q9NQZ7 604 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TRIM10Q9UDY6 481 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 TFR2Q9UP52 801 aa15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 YBX2Q9Y2T7 364 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-202ENST00000339255 A0A0U1RQJ8 604 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 WDR27A2RRH5 827 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 LPXNO60711 386 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 BEST1O76090 585 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ABLIM3O94929 683 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ERBB2P04626 1255 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ADH1AP07327 375 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 RPL17P18621 184 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 CYP2F1P24903 491 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 DNAJB2P25686 324 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 NOP2P46087 812 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 NAP1L1P55209 391 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 RAB41Q5JT25 222 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 CYP4A22Q5TCH4 519 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 XYLT1Q86Y38 959 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 DNAAF5Q86Y56 855 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 SPPL3Q8TCT6 385 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ATRIPQ8WXE1 791 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 PGLYRP2Q96PD5 576 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 NUP85Q9BW27 656 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 EMILIN2Q9BXX0 1053 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 RHOBTB2Q9BYZ6 727 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 LRRC4Q9HBW1 653 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 TMEM30AQ9NV96 361 aa15.31■□□□□ 0.04
NIPAL3-202ENST00000339255 PLXNA3P51805 1871 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 F8VP50 259 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 H3BNC9 293 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 TULP2O00295 520 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 C1RP00736 705 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 ATF2P15336 505 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 GRIK1P39086 918 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 TUFMP49411 452 aaKnown RBP15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 RGS7P49802 495 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 ADIGQ0VDE8 80 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 MAMLD1Q13495 774 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 PPP2R2DQ66LE6 453 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
NIPAL3-202ENST00000339255 SCML4Q8N228 414 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms