RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TMEM132AQ24JP5 1023 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 SLC5A9Q2M3M2 681 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 RNF220Q5VTB9 566 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 PASD1Q8IV76 773 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 BRSK2Q8IWQ3 736 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 THNSL1Q8IYQ7 743 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 MIPEPQ99797 713 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.7■□□□□ 0.74
PSPC1-201ENST00000338910 HBP1O60381 514 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 BPIFB4P59827 614 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 LLGL2Q6P1M3 1020 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 MAMDC4Q6UXC1 1216 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 EXOC8Q8IYI6 725 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 ABRAQ8N0Z2 381 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 ATL2Q8NHH9 583 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 MAIP1Q8WWC4 291 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 PARK7Q99497 189 aaKnown RBP19.7■□□□□ 0.74
PSPC1-201ENST00000338910 MTMR12Q9C0I1 747 aa19.7■□□□□ 0.74
PSPC1-201ENST00000338910 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.7■□□□□ 0.74
PSPC1-201ENST00000338910 OGTO15294 1046 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 CSDE1O75534 798 aaKnown RBP19.69■□□□□ 0.74
PSPC1-201ENST00000338910 CTC1Q2NKJ3 1217 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 RFWD3Q6PCD5 774 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 MCOLN2Q8IZK6 566 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 PPP1R16BQ96T49 567 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 SAR1AQ9NR31 198 aa19.69■□□□□ 0.74
PSPC1-201ENST00000338910 R3HDM2Q9Y2K5 976 aaKnown RBP19.69■□□□□ 0.74
PSPC1-201ENST00000338910 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-201ENST00000338910 C2CD2LO14523 706 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 SNAI1O95863 264 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-201ENST00000338910 SLC26A2P50443 739 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 OCRLQ01968 901 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 PHC3Q8NDX5 983 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 TRABDQ9H4I3 376 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 MINDY3Q9H8M7 445 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 ERAP1Q9NZ08 941 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 ZFP69BQ9UJL9 534 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 HNRNPCL1O60812 293 aaKnown RBP19.68■□□□□ 0.74
PSPC1-201ENST00000338910 GNA15P30679 374 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 HUNKP57058 714 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 LAMC2Q13753 1193 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 CYP4F22Q6NT55 531 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 NLRP9Q7RTR0 991 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 TDRPQ86YL5 185 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 BBOF1Q8ND07 529 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 VTA1Q9NP79 307 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 ANAPC7Q9UJX3 599 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 SMG5Q9UPR3 1016 aaKnown RBP19.68■□□□□ 0.74
PSPC1-201ENST00000338910 NUMBLQ9Y6R0 609 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 SIP14410 1827 aa19.68■□□□□ 0.74
PSPC1-201ENST00000338910 EXOC1LA0A1B0GW35 172 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 INSRRP14616 1297 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 RPA3P35244 121 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 MAGEA4P43358 317 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 NSFP46459 744 aaKnown RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 MYL6P60660 151 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 TFAMQ00059 246 aaKnown RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 MCL1Q07820 350 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 ATF7IP2Q5U623 682 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 SNX30Q5VWJ9 437 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 OTOAQ7RTW8 1153 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 CLNKQ7Z7G1 428 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF677Q86XU0 584 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 WDR49Q8IV35 697 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 NRG4Q8WWG1 115 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 CADM1Q9BY67 442 aaKnown RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 IMPG2Q9BZV3 1241 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 KATNBL1Q9H079 304 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 CPSF3Q9UKF6 684 aaKnown RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 ACKR2O00590 384 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 IQCF3P0C7M6 154 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 FGFR1P11362 822 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 TBXAS1P24557 533 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 MAPK4P31152 587 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 SESN3P58005 492 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 TFDP1Q14186 410 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 GRB14Q14449 540 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 SLC1A5Q15758 541 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 PDCD2Q16342 344 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-201ENST00000338910 FAM110CQ1W6H9 321 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 FOXB2Q5VYV0 432 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 IZUMO3Q5VZ72 239 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 EEF1DP3Q658K8 133 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 DSTYKQ6XUX3 929 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 AFG1LQ8WV93 481 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 TRAPPC9Q96Q05 1148 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 RBM15Q96T37 977 aaKnown RBP eCLIP19.67■□□□□ 0.743e-7■■■■□ 24.9
PSPC1-201ENST00000338910 SCOCQ9UIL1 159 aa19.67■□□□□ 0.74
PSPC1-201ENST00000338910 CYP1A1P04798 512 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-201ENST00000338910 LGALS2P05162 132 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 GSTA2P09210 222 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 RCN2Q14257 317 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 PKN2Q16513 984 aaKnown RBP19.66■□□□□ 0.74
PSPC1-201ENST00000338910 DUOXA2Q1HG44 320 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 TSHZ1Q6ZSZ6 1077 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CCDC89Q8N998 374 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 MAML3Q96JK9 1138 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 FZD8Q9H461 694 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms