RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 USP18Q9UMW8 372 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 DNAJC25-GNG10A0A024R161 153 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 A0A1W2PPM1 405 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 MCF2LO15068 1137 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 TYROBPO43914 113 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 C22orf31O95567 290 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 TRUB2O95900 331 aaKnown RBP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 HMGCRP04035 888 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 MCF2P10911 925 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 SSTR1P30872 391 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 GPD2P43304 727 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 EIF3EP60228 445 aaKnown RBP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 KCNJ2P63252 427 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 MSS51Q4VC12 460 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 C3orf62Q6ZUJ4 267 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 ECHDC2Q86YB7 292 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 UNC45BQ8IWX7 931 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 ADPGKQ9BRR6 497 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 CALN1Q9BXU9 219 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 VRTNQ9H8Y1 702 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 TXNRD2Q9NNW7 524 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 SSU72Q9NP77 194 aaKnown RBP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 BAIAP2L1Q9UHR4 511 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 PNMA3Q9UL41 463 aa15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 ZMYND8Q9ULU4 1186 aaPredicted RBP15.78■□□□□ 0.12
TNFSF13-201ENST00000338784 E7ESA3 106 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 IGF2BP3O00425 579 aaKnown RBP eCLIP15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 VDRP11473 427 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 KRT4P19013 534 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 PCK1P35558 622 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 IREB2P48200 963 aaKnown RBP15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 TAF5Q15542 800 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 FAM187BQ17R55 369 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 KLHL38Q2WGJ6 581 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 Q3C1V9 767 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 FAM102AQ5T9C2 384 aaPredicted RBP15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 WLSQ5T9L3 541 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 HHATQ5VTY9 493 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 PALM2Q8IXS6 379 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 PDIK1LQ8N165 341 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 TMEM130Q8N3G9 435 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 FAM71DQ8N9W8 422 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 FBXO36Q8NEA4 188 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 CXorf38Q8TB03 319 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 LRRC8CQ8TDW0 803 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 HEXIM2Q96MH2 286 aaKnown RBP15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 MAK16Q9BXY0 300 aaKnown RBP15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 ASB7Q9H672 318 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 ACSS3Q9H6R3 686 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 ERAP1Q9NZ08 941 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 RBPJLQ9UBG7 517 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 GRID1Q9ULK0 1009 aa15.77■□□□□ 0.12
TNFSF13-201ENST00000338784 RBP3P10745 1247 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SKIV2L2P42285 1042 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ZNF143P52747 638 aaPredicted RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 IGBP1P78318 339 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 POU5F1BQ06416 359 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 TTLL4Q14679 1199 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ADGRD1Q6QNK2 874 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SPATA18Q8TC71 538 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ADAM33Q9BZ11 813 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ARHGEF3Q9NR81 526 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 XPO7Q9UIA9 1087 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 TCRBV7S3A2A0A539 114 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ADM5C9JUS6 153 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 CXCL11O14625 94 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 CSDE1O75534 798 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 TMEM63AO94886 807 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ZWINTO95229 277 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 CCNB1P14635 433 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 TSHRP16473 764 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 STIP1P31948 543 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 BASP1P80723 227 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 DPYSL3Q14195 570 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SETDB1Q15047 1291 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SLC1A5Q15758 541 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ASRGL1Q7L266 308 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 ERO1BQ86YB8 467 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SULF1Q8IWU6 871 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 TAB3Q8N5C8 712 aaPredicted RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 FBF1Q8TES7 1133 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 SPOCK2Q92563 424 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 HPDLQ96IR7 371 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 PAFAH2Q99487 392 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 DHRS4Q9BTZ2 278 aa15.76■□□□□ 0.11
TNFSF13-201ENST00000338784 OTOFQ9HC10 1997 aa15.75■□□□□ 0.11
TNFSF13-201ENST00000338784 A0A087WZ62 844 aa15.75■□□□□ 0.11
TNFSF13-201ENST00000338784 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
TNFSF13-201ENST00000338784 HGSO14964 777 aaPredicted RBP15.75■□□□□ 0.11
TNFSF13-201ENST00000338784 EDF1O60869 148 aaKnown RBP15.75■□□□□ 0.11
TNFSF13-201ENST00000338784 EZRP15311 586 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms