RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 PARD6AQ9NPB6 346 aa14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 EXOC1Q9NV70 894 aa14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 DUS2Q9NX74 493 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 CHORDC1Q9UHD1 332 aaPredicted RBP14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 OBSL1O75147 1896 aa14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 DMXL1Q9Y485 3027 aa14.26□□□□□ -0.13
NUDCD3-201ENST00000338427 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 ANAPC1Q9H1A4 1944 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 TRAV19A0A0A6YYK7 116 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 RPN1P04843 607 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 CKMP06732 381 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 USP17L7P0C7H9 530 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 TAF10Q12962 218 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 MTF1Q14872 753 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF77Q15935 545 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 TMEM196Q5HYL7 178 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 CC2D1AQ6P1N0 951 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 VSTM1Q6UX27 236 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 PRR23BQ6ZRT6 265 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 DENND5BQ6ZUT9 1274 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 ECT2Q9H8V3 914 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 UXTQ9UBK9 157 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 SDK1Q7Z5N4 2213 aa14.25□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 TRDMT1O14717 391 aaKnown RBP14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 CLSTN1O94985 981 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 NR3C1P04150 777 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 SYKP43405 635 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 PGFP49763 221 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 PSMD2Q13200 908 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 NCOA4Q13772 614 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF268Q14587 947 aaPredicted RBP14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 RSPO4Q2I0M5 234 aaPredicted RBP14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 EML3Q32P44 896 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 CEP135Q66GS9 1140 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 SCAMP5Q8TAC9 235 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 OSCP1Q8WVF1 389 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 MSANTD3Q96H12 275 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 SMPD4Q9NXE4 827 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 TRPM5Q9NZQ8 1165 aa14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
NUDCD3-201ENST00000338427 SOBPA7XYQ1 873 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 LEFTY2O00292 366 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 PDXKO00764 312 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 BEST1O76090 585 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 FAM163BP0C2L3 166 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 ANXA13P27216 316 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 ATICP31939 592 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 IFNAR2P48551 515 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 NRLP54845 237 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 CLDN10P78369 228 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 KRT85P78386 507 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 SIM2Q14190 667 aaPredicted RBP14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 MAPRE1Q15691 268 aaKnown RBP14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF699Q32M78 642 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF667Q5HYK9 610 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 SV2AQ7L0J3 742 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 WBP2Q969T9 261 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 SYAP1Q96A49 352 aaPredicted RBP14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 EEF2KMTQ96G04 330 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 C8orf48Q96LL4 319 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 MED10Q9BTT4 135 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 TTLL2Q9BWV7 592 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 FAM126AQ9BYI3 521 aaPredicted RBP14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 KIF9Q9HAQ2 790 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 HMGXB4Q9UGU5 601 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
NUDCD3-201ENST00000338427 FAM237AA0A1B0GTK4 181 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 RNF40O75150 1001 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 SLC6A11P48066 632 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 GRSF1Q12849 480 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 DPYDQ12882 1025 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 USP4Q13107 963 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 KCNB1Q14721 858 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 PDGFRLQ15198 375 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 C12orf29Q8N999 325 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 P2RY13Q9BPV8 354 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 CPQQ9Y646 472 aa14.22□□□□□ -0.13
NUDCD3-201ENST00000338427 PTPRDP23468 1912 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 MYOFQ9NZM1 2061 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 TRIM66O15016 1216 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 AKAP3O75969 853 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 ZNF202O95125 648 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
NUDCD3-201ENST00000338427 CCDC130P13994 396 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms