RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TMEM240Q5SV17 173 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 KCNT2Q6UVM3 1135 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CMTR2Q8IYT2 770 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 LRRN4CLQ8ND94 238 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SMARCD1Q96GM5 515 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 KCNK16Q96T55 309 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 YME1L1Q96TA2 773 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.084e-16■□□□□ 11
CDK5RAP3-201ENST00000338399 CYLDQ9NQC7 956 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TMEM30AQ9NV96 361 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 IP6K2Q9UHH9 426 aa15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MRPL42Q9Y6G3 142 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ACADSBP45954 432 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZNF252P-AS1Q0IIN9 211 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SLC39A12Q504Y0 691 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 EMC1Q8N766 993 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZMIZ2Q8NF64 920 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MYRIPQ8NFW9 859 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CD101Q93033 1021 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 HTATIP2Q9BUP3 242 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZCWPW1Q9H0M4 648 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 USTQ9Y2C2 406 aa15.52■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GRAP2O75791 330 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SLC1A1P43005 524 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZNF280DQ6N043 979 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 OLFML1Q6UWY5 402 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CREG2Q8IUH2 290 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZDHHC17Q8IUH5 632 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 DCP1BQ8IZD4 617 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MNS1Q8NEH6 495 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 KRT35Q92764 455 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZNF558Q96NG5 402 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TTPALQ9BTX7 342 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 KIAA1671Q9BY89 1806 aa15.52■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MIF4GDA9UHW6 222 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CAPN15O75808 1086 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MARCKSL1P49006 195 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ADIGQ0VDE8 80 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TAF5Q15542 800 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 UBL4BQ8N7F7 174 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 KCTD13Q8WZ19 329 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MS4A14Q96JA4 679 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 LRRC4Q9HBW1 653 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CSNK1G1Q9HCP0 422 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 EHD2Q9NZN4 543 aa15.51■□□□□ 0.07
CDK5RAP3-201ENST00000338399 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 F8VP50 259 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PDE2AO00408 941 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GJB5O95377 273 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 EFEMP2O95967 443 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 LAG3P18627 525 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PSMA2P25787 234 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 NDUFV1P49821 464 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PIGHQ14442 188 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SLC39A11Q8N1S5 342 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CEP112Q8N8E3 955 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 COLGALT1Q8NBJ5 622 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ALG3Q92685 438 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.077e-8■■□□□ 13.1
CDK5RAP3-201ENST00000338399 PBKQ96KB5 322 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZBED2Q9BTP6 218 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SMARCAL1Q9NZC9 954 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 LCMT1Q9UIC8 334 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TMEM59LQ9UK28 342 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CCDC66A2RUB6 948 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 H7C4K7 107 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTNNA2P26232 953 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MAN1A1P33908 653 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTNNA1P35221 906 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SSR1P43307 286 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PEX5P50542 639 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TKTL1P51854 596 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ARPP19P56211 112 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 USP41Q3LFD5 358 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CCDC181Q5TID7 509 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 DCAF12L1Q5VU92 463 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PRSS55Q6UWB4 352 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RSPO2Q6UXX9 243 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ANKS3Q6ZW76 656 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FNIP1Q8TF40 1166 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 NDRG1Q92597 394 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 DPF3Q92784 378 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 UBXN6Q9BZV1 441 aa15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ABI2Q9NYB9 513 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PCDHA3Q9Y5H8 950 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms