RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 GJC2Q5T442 439 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 PEX26Q7Z412 305 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 RTN4RL1Q86UN2 441 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 PPM1KQ8N3J5 372 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 UIMC1Q96RL1 719 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 KLC2Q9H0B6 622 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 AP5M1Q9H0R1 490 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 FAM105AQ9NUU6 356 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 ATP2C2O75185 946 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 RARAP10276 462 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 FGFR3P22607 806 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 HOXD10P28358 340 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 LHX1P48742 406 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 ACLYP53396 1101 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 LILRA4P59901 499 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 LMNB2Q03252 620 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 PRKG1Q13976 671 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 DPYSQ14117 519 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CASP8Q14790 479 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 PRKD1Q15139 912 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CEP128Q6ZU80 1094 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 OSTM1Q86WC4 334 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 ECHDC2Q86YB7 292 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 FAM217AQ8IXS0 508 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 FUBP3Q96I24 572 aaKnown RBP eCLIP5.66□□□□□ -1.59e-9■■□□□ 12.1
PRPF4B-201ENST00000337659 TSGA13Q96PP4 275 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 SH2D3AQ9BRG2 576 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 ADPGKQ9BRR6 497 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CNPY3Q9BT09 278 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 PI4K2AQ9BTU6 479 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 NT5C1AQ9BXI3 368 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 DUSP16Q9BY84 665 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 POLD4Q9HCU8 107 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 TUBGCP4Q9UGJ1 667 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 POLIQ9UNA4 740 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 CDY2AQ9Y6F7 541 aa5.66□□□□□ -1.5
PRPF4B-201ENST00000337659 TTC3P53804 2025 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 IGLV3-10A0A075B6K4 115 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 MACROD2A1Z1Q3 448 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ARVCFO00192 962 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ENC1O14682 589 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SYN3O14994 580 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ITGB3P05106 788 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 FYNP06241 537 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ITIH2P19823 946 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 WEE1P30291 646 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 EIF3BP55884 814 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SLC6A3Q01959 620 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 MYO1EQ12965 1108 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 NOMO1Q15155 1222 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 CCDC14Q49A88 953 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 TCERG1LQ5VWI1 586 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ALG1LQ6GMV1 187 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 RGS9BPQ6ZS82 235 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 EP400NLQ6ZTU2 488 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 MAATS1Q7Z4T9 603 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SP7Q8TDD2 431 aaPredicted RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 MZB1Q8WU39 189 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 AZIN2Q96A70 460 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ROPN1BQ9BZX4 212 aaPredicted RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 RAB17Q9H0T7 212 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 NEUROG2Q9H2A3 272 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ROPN1Q9HAT0 212 aaPredicted RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ARFGAP3Q9NP61 516 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SNTG2Q9NY99 539 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF212Q9UDV6 495 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 A0A1W2PQ45 241 aaPredicted RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 A0A1W2PQY0 241 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 C5orf60A6NFR6 353 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 HACD1B0YJ81 288 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SUN1O94901 812 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 TFRCP02786 760 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 TCF3P15923 654 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 PFKLP17858 780 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 CCND3P30281 292 aaPredicted RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 POLR2BP30876 1174 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 NSFP46459 744 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SNX16P57768 344 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 C2orf54Q08AI8 447 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 STEAP4Q687X5 459 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 KDM7AQ6ZMT4 941 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 SPOCD1Q6ZMY3 1216 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 TRMT10CQ7L0Y3 403 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 HDAC7Q8WUI4 952 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF653Q96CK0 615 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 CPB2Q96IY4 423 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 PEBP4Q96S96 227 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 MRPL45Q9BRJ2 306 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 ADAM33Q9BZ11 813 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 NXF3Q9H4D5 531 aaKnown RBP5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 PCDH9Q9HC56 1237 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 CLEC11AQ9Y240 323 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 NR2E1Q9Y466 385 aa5.65□□□□□ -1.5
PRPF4B-201ENST00000337659 KPNA7A9QM74 516 aa5.65□□□□□ -1.51
PRPF4B-201ENST00000337659 FTCDO95954 541 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms