RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SPATS2LQ9NUQ6 558 aaKnown RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 SETD4Q9NVD3 440 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 HMGXB4Q9UGU5 601 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NFS1Q9Y697 457 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 B2RBV5 119 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 CYB561D2O14569 222 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 OGTO15294 1046 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 TOP3BO95985 862 aaKnown RBP8.59□□□□□ -1.03
HPS4-201ENST00000336873 TPH1P17752 444 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 RBL1P28749 1068 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SERPINB3P29508 390 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 MSX2P35548 267 aaPredicted RBP8.59□□□□□ -1.03
HPS4-201ENST00000336873 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
HPS4-201ENST00000336873 CCNYL1Q8N7R7 359 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 AGBL3Q8NEM8 1001 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 BORCS6Q96GS4 357 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SERPINB12Q96P63 405 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 CPXM1Q96SM3 734 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 MAGEB5Q9BZ81 275 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 ATXN3LQ9H3M9 355 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 R3HDMLQ9H3Y0 253 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 ASNSD1Q9NWL6 643 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 PSMC3IPQ9P2W1 217 aaPredicted RBP8.59□□□□□ -1.03
HPS4-201ENST00000336873 GOLGA8QA0A0J9YX86 632 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 IQANK1A0A1B0GTG1 560 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 GOLGA8OA6NCC3 632 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 MEI4A8MW99 385 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 GOLGA8NF8WBI6 632 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SMIM24O75264 130 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 TRPA1O75762 1119 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 ZMPSTE24O75844 475 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 ZCCHC18P0CG32 403 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 MYL2P10916 166 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 POU5F1BQ06416 359 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 CHI3L2Q15782 390 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 CCNG2Q16589 344 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 PTPN20Q4JDL3 420 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 JADE1Q6IE81 842 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 CCDC125Q86Z20 511 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 LMNTD2Q8IXW0 634 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 FAM172AQ8WUF8 416 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.59□□□□□ -1.03
HPS4-201ENST00000336873 GPRASP2Q96D09 838 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SUDS3Q9H7L9 328 aaPredicted RBP8.59□□□□□ -1.03
HPS4-201ENST00000336873 TXLNGQ9NUQ3 528 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 SLC17A6Q9P2U8 582 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 PCYOX1Q9UHG3 505 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
HPS4-201ENST00000336873 TCRBV7S3A2A0A539 114 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 LACTBL1A8MY62 500 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 KRT37O76014 449 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 HMGCRP04035 888 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 PAX7P23759 505 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 TYK2P29597 1187 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 GMPRP36959 345 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 YWHAEP62258 255 aaKnown RBP8.59□□□□□ -1.04
HPS4-201ENST00000336873 ZNF200P98182 395 aaPredicted RBP8.59□□□□□ -1.04
HPS4-201ENST00000336873 GCNT1Q02742 428 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 VGLL4Q14135 290 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 GOLGA7BQ2TAP0 167 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.04
HPS4-201ENST00000336873 C1orf146Q5VVC0 180 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 SLC26A7Q8TE54 656 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 ART4Q93070 314 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 PGM2Q96G03 612 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 MBOAT7Q96N66 472 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 KLC2Q9H0B6 622 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 MANSC1Q9H8J5 431 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 SPON1Q9HCB6 807 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 SNTG2Q9NY99 539 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.04
HPS4-201ENST00000336873 COL16A1Q07092 1604 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 FAM237BA0A1B0GVD1 139 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 CYP1A2P05177 515 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 UBTFL6P0CB48 400 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 GARTP22102 1010 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 ANXA13P27216 316 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 MMP13P45452 471 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 HSD17B4P51659 736 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 TMEM132DQ14C87 1099 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 RBBP5Q15291 538 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 GRAMD1BQ3KR37 738 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 CD302Q8IX05 232 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 SMC1BQ8NDV3 1235 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 PIP4K2CQ8TBX8 421 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 WHRNQ9P202 907 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 NCANO14594 1321 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 MYH7BA7E2Y1 1941 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 ASAP2O43150 1006 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 ADCY3O60266 1144 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 TSPAN3O60637 253 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 AMPD1P23109 780 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 NAMPTP43490 491 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms