RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZNF544Q6NX49 715 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 E2F7Q96AV8 911 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CARD14Q9BXL6 1004 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 OSBPL6Q9BZF3 934 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CSADQ9Y600 493 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ABCB11O95342 1321 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 TRMUO75648 421 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 RPN2P04844 631 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 LIFRP42702 1097 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MTFR1Q15390 333 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MEI1Q5TIA1 1274 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 RBM44Q6ZP01 1051 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 RASSF6Q6ZTQ3 369 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ADCK2Q7Z695 626 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ELMOD1Q8N336 334 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 FAM89AQ96GI7 184 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MND1Q9BWT6 205 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 RAB26Q9ULW5 256 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 LOXHD1Q8IVV2 1947 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 WDR7Q9Y4E6 1490 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 FAM92AA1XBS5 289 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF185O15231 689 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MAPK7Q13164 816 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 NME3Q13232 169 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 TAF5Q15542 800 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ABRAXAS1Q6UWZ7 409 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 KDELC2Q7Z4H8 507 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 LRRC71Q8N4P6 559 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 USP11P51784 963 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PDK3Q15120 406 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 SURF1Q15526 300 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CHRNA2Q15822 529 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 GRAMD1CQ8IYS0 662 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 EHD1Q9H4M9 534 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 AS3MTQ9HBK9 375 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ASNSD1Q9NWL6 643 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PRG4Q92954 1404 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 AFF2P51816 1311 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 EPN2O95208 641 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 GTF2H1P32780 548 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ARSEP51690 589 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ILF2Q12905 390 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 FUT11Q495W5 492 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 SYTL1Q8IYJ3 562 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 FAM9CQ8IZT9 166 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 KBTBD8Q8NFY9 601 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 DCUN1D1Q96GG9 259 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PLEKHG4BQ96PX9 1271 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ECSITQ9BQ95 431 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 C12orf4Q9NQ89 552 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 A0A087WWV3 80 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 KRT36O76013 467 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 TKTP29401 623 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 MAGEA10P43363 369 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 NCCRP1Q6ZVX7 275 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CAMK1DQ8IU85 385 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 NACC1Q96RE7 527 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF304Q9HCX3 659 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ADD3Q9UEY8 706 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 UMODL1Q5DID0 1318 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 NDUFB5O43674 189 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ALOX12P18054 663 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 ADAM17P78536 824 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CACTIN-AS1Q8N1I8 211 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 STN1Q9H668 368 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 NEU2Q9Y3R4 380 aa10.69□□□□□ -0.7
SPTBN1-201ENST00000333896 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 GSTM1P09488 218 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 GP5P40197 560 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 NNMTP40261 264 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 C2CD6Q53TS8 623 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MTDHQ86UE4 582 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ELMO2Q96JJ3 720 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 A0A0G2JPF8 293 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 HNRNPCL3B7ZW38 293 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 HNRNPCL4P0DMR1 293 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 COMMD2Q86X83 199 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ILKAPQ9H0C8 392 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC24A2Q9UI40 661 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ZDHHC9Q9Y397 364 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 GNPATO15228 680 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 MSH3P20585 1137 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 TRAF2Q12933 501 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF394Q53GI3 561 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 FRMD5Q7Z6J6 570 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 ANKMY2Q8IV38 441 aa10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 C14orf93Q9H972 538 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-201ENST00000333896 RAPGEFL1Q9UHV5 662 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms