RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PHACTR1Q9C0D0 580 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 ARHGEF4Q9NR80 690 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 ZNF70Q9UC06 446 aaPredicted RBP24.7■■□□□ 1.54
TSKU-201ENST00000333090 C3orf70A6NLC5 250 aaPredicted RBP24.69■■□□□ 1.54
TSKU-201ENST00000333090 ENO1P06733 434 aaKnown RBP24.69■■□□□ 1.54
TSKU-201ENST00000333090 GSTA2P09210 222 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 ELK3P41970 407 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 SERPINB4P48594 390 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 STYK1Q6J9G0 422 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 CEP120Q8N960 986 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 ATP6V0A1Q93050 837 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 TCRBV9S1A1TA0A576 114 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 MAGEA13PA6NCF6 341 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 UBTFL6P0CB48 400 aaPredicted RBP24.69■■□□□ 1.54
TSKU-201ENST00000333090 HARSP12081 509 aaKnown RBP24.69■■□□□ 1.54
TSKU-201ENST00000333090 FBXO27Q8NI29 283 aa24.69■■□□□ 1.54
TSKU-201ENST00000333090 IQCGQ9H095 443 aaKnown RBP24.69■■□□□ 1.54
TSKU-201ENST00000333090 A8MXQ7 604 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 PSMA2P25787 234 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 YWHAGP61981 247 aaKnown RBP eCLIP24.68■■□□□ 1.54
TSKU-201ENST00000333090 ZNF200P98182 395 aaPredicted RBP24.68■■□□□ 1.54
TSKU-201ENST00000333090 FAM182AQ5T1J6 154 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 GPAT2Q6NUI2 795 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 CCNJLQ8IV13 435 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 TMEM35BQ8NCS4 154 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 CCDC110Q8TBZ0 833 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 GATA6Q92908 595 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 FGD4Q96M96 766 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 PXMP2Q9NR77 195 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 DLGAP5Q15398 846 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 IMPG2Q9BZV3 1241 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 TRIM4Q9C037 500 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 ETAA1Q9NY74 926 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 STRIP2Q9ULQ0 834 aa24.68■■□□□ 1.54
TSKU-201ENST00000333090 KBTBD13C9JR72 458 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 STBD1O95210 358 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 CD48P09326 243 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 IL1R2P27930 398 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 MTERF2Q49AM1 385 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 DDX50Q9BQ39 737 aaKnown RBP24.67■■□□□ 1.54
TSKU-201ENST00000333090 MSTO1Q9BUK6 570 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 MECRQ9BV79 373 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 PDLIM7Q9NR12 457 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 CYP26B1Q9NR63 512 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 RFC1P35251 1148 aaPredicted RBP24.67■■□□□ 1.54
TSKU-201ENST00000333090 ZNF132P52740 706 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 TREML1Q86YW5 311 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 TTC13Q8NBP0 860 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 SLC44A1Q8WWI5 657 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 PPARGC1AQ9UBK2 798 aaKnown RBP24.67■■□□□ 1.54
TSKU-201ENST00000333090 SLC9A2Q9UBY0 812 aa24.67■■□□□ 1.54
TSKU-201ENST00000333090 STAM2O75886 525 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 GCLCP48506 637 aaPredicted RBP24.66■■□□□ 1.54
TSKU-201ENST00000333090 PRKCEQ02156 737 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 SLC18A2Q05940 514 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 KDSRQ06136 332 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 CDHR3Q6ZTQ4 885 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 BBS12Q6ZW61 710 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 RBM15BQ8NDT2 890 aaKnown RBP24.66■■□□□ 1.54
TSKU-201ENST00000333090 TMEM143Q96AN5 459 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 CLPTM1LQ96KA5 538 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 SRPK1Q96SB4 655 aaKnown RBP24.66■■□□□ 1.54
TSKU-201ENST00000333090 CGRRF1Q99675 332 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 TARS2Q9BW92 718 aaKnown RBP24.66■■□□□ 1.54
TSKU-201ENST00000333090 CNTN3Q9P232 1028 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 CNTNAP1P78357 1384 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 COPEO14579 308 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 RTP1P59025 263 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 TMPRSS6Q8IU80 811 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 TRAPPC9Q96Q05 1148 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 ANGPTL2Q9UKU9 493 aa24.66■■□□□ 1.54
TSKU-201ENST00000333090 KAT6AQ92794 2004 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 H0YCG3 227 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 FAM155BO75949 473 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 LSM8O95777 96 aaKnown RBP24.65■■□□□ 1.54
TSKU-201ENST00000333090 CST3P01034 146 aaPredicted RBP24.65■■□□□ 1.54
TSKU-201ENST00000333090 RAP1GDS1P52306 607 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 GHRHRQ02643 423 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 SLC25A11Q02978 314 aaKnown RBP24.65■■□□□ 1.54
TSKU-201ENST00000333090 SH2D5Q6ZV89 423 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 POLNQ7Z5Q5 900 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 WDTC1Q8N5D0 677 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 NIPA2Q8N8Q9 360 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 RDM1Q8NG50 284 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 LRRIQ4A6NIV6 560 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 I3L4J1 428 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 SMAPO00193 183 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 LRCH4O75427 683 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 ZCCHC18P0CG32 403 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 SPDYE2Q495Y8 402 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 ARID3BQ8IVW6 561 aaPredicted RBP24.65■■□□□ 1.54
TSKU-201ENST00000333090 CCDC60Q8IWA6 550 aaPredicted RBP24.65■■□□□ 1.54
TSKU-201ENST00000333090 CTAGE3PQ8IX95 158 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 SMC1BQ8NDV3 1235 aa24.65■■□□□ 1.54
TSKU-201ENST00000333090 EIF3EP60228 445 aaKnown RBP24.64■■□□□ 1.54
TSKU-201ENST00000333090 TAP1Q03518 808 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 RFX6Q8HWS3 928 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 ARFGAP1Q8N6T3 406 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 ZFAND2BQ8WV99 257 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 GBP5Q96PP8 586 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms