RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 FAM136AQ96C01 138 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 TTC1Q99614 292 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 VPS11Q9H270 941 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 APOBEC3GQ9HC16 384 aaKnown RBP9.12□□□□□ -0.95
LIMK2-201ENST00000331728 CISHQ9NSE2 258 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 SLC17A7Q9P2U7 560 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 TAF1LQ8IZX4 1826 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 SMAPO00193 183 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 FCHO1O14526 889 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 MAFGO15525 162 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 MAP3K13O43283 966 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 TOM1L1O75674 476 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 C4BPAP04003 597 aaKnown RBP9.12□□□□□ -0.95
LIMK2-201ENST00000331728 PYGBP11216 843 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 AP3M2P53677 418 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 MYL6P60660 151 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 CDK16Q00536 496 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 MTHFD1LQ6UB35 978 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 NUDCD3Q8IVD9 361 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 CCDC60Q8IWA6 550 aaPredicted RBP9.12□□□□□ -0.95
LIMK2-201ENST00000331728 NKD2Q969F2 451 aaPredicted RBP9.12□□□□□ -0.95
LIMK2-201ENST00000331728 ACAP3Q96P50 834 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 WWP1Q9H0M0 922 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 SLC38A10Q9HBR0 1119 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 RAB6BQ9NRW1 208 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 ARL8BQ9NVJ2 186 aa9.12□□□□□ -0.95
LIMK2-201ENST00000331728 GSC2O15499 205 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 PRPSAP2O60256 369 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ZNF862O60290 1169 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 KRT38O76015 456 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 RPL22P35268 128 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ELK3P41970 407 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 CUL3Q13618 768 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 SURF1Q15526 300 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ZNF667Q5HYK9 610 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 RASIP1Q5U651 963 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ANKRD22Q5VYY1 191 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 OR52E8Q6IFG1 317 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 DRICH1Q6PGQ1 229 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 C1orf228Q6PIY5 440 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 EMC1Q8N766 993 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 APOPT1Q96IL0 206 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 FBXO6Q9NRD1 293 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ZNF277Q9NRM2 450 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ARMCX1Q9P291 453 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 TXNDC16Q9P2K2 825 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 HEY1Q9Y5J3 304 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 TYROBPO43914 113 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 NAMPTP43490 491 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 SERPINB4P48594 390 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 FAAP100Q0VG06 881 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 DYNC1I2Q13409 638 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 RASA2Q15283 850 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ACSBG2Q5FVE4 666 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 FAM102AQ5T9C2 384 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 OR6B2Q6IFH4 312 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 NTPCRQ9BSD7 190 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 MRPL4Q9BYD3 311 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 FRMD8P1Q9BZ68 369 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 KLC2Q9H0B6 622 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 CYLDQ9NQC7 956 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ASNSD1Q9NWL6 643 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 NDE1Q9NXR1 346 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 PDP2Q9P2J9 529 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ARHGAP28Q9P2N2 729 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 KBTBD13C9JR72 458 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 TXNDC9O14530 226 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 SPAG6O75602 509 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 AP1B1Q10567 949 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 DGKZQ13574 1117 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 INO80BQ9C086 356 aaPredicted RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 SSU72Q9NP77 194 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 XPNPEP1Q9NQW7 623 aa9.11□□□□□ -0.95
LIMK2-201ENST00000331728 ZC3H7BQ9UGR2 993 aaKnown RBP9.11□□□□□ -0.95
LIMK2-201ENST00000331728 GREB1LQ9C091 1923 aaPredicted RBP9.1□□□□□ -0.95
LIMK2-201ENST00000331728 ZNF536O15090 1300 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 M0QYV0 167 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 VNN1O95497 513 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 OATP04181 439 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 SNRPAP09012 282 aaKnown RBP9.1□□□□□ -0.95
LIMK2-201ENST00000331728 SUPT20HL2P0C7V6 817 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 HSPA1LP34931 641 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 CDKN2BP42772 138 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 ALDH18A1P54886 795 aaKnown RBP9.1□□□□□ -0.95
LIMK2-201ENST00000331728 RTP1P59025 263 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 AP2B1P63010 937 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 CFAP157Q5JU67 520 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
LIMK2-201ENST00000331728 BSPRYQ5W0U4 402 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms