RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C7orf61Q8IZ16 206 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 MAF1Q9H063 256 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 VIPAS39Q9H9C1 493 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 Q9Y3F1 56 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 USP17L7P0C7H9 530 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 PLTPP55058 493 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 CDH6P55285 790 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 KYAT1Q16773 422 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 DDR2Q16832 855 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 ZC3H3Q8IXZ2 948 aaKnown RBP16.68■□□□□ 0.26
PDGFB-201ENST00000331163 SLC4A11Q8NBS3 891 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 NOCTQ9UK39 431 aaKnown RBP16.68■□□□□ 0.26
PDGFB-201ENST00000331163 HNRNPH3P31942 346 aaKnown RBP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 PRKCIP41743 596 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 AARSP49588 968 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 HADHQ16836 314 aaKnown RBP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 SLC24A5Q71RS6 500 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 CABS1Q96KC9 395 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 ZNF518BQ9C0D4 1074 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 STYXL1Q9Y6J8 313 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 H7C0C1 242 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 CALB1P05937 261 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 TCF4P15884 667 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 ATP5OP48047 213 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 DENND2CQ68D51 928 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 RNF10Q8N5U6 811 aaKnown RBP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
PDGFB-201ENST00000331163 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 COQ4Q9Y3A0 265 aa16.67■□□□□ 0.26
PDGFB-201ENST00000331163 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 HAS3O00219 553 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PTGESO14684 152 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 FAM200BP0CF97 657 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 EN2P19622 333 aaPredicted RBP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 AXLP30530 894 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 ATXN1P54253 815 aaKnown RBP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 LHX8Q68G74 356 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PMF1Q6P1K2 205 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 RXFP2Q8WXD0 754 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 TMEM169Q96HH4 297 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 TMEM209Q96SK2 561 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 SUFUQ9UMX1 484 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 SGK1O00141 431 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 NOMO3P69849 1222 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 CDK17Q00537 523 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 IFFO1Q0D2I5 559 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PTK7Q13308 1070 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PXYLP1Q8TE99 480 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PIWIL1Q96J94 861 aaKnown RBP16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PTPRFP10586 1907 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 MAPK13O15264 365 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 TKTL1P51854 596 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 B3GALNT2Q8NCR0 500 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 ALG3Q92685 438 aa16.66■□□□□ 0.26
PDGFB-201ENST00000331163 PYGMP11217 842 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 RALAP11233 206 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 VDRP11473 427 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 PTPN1P18031 435 aaKnown RBP16.65■□□□□ 0.26
PDGFB-201ENST00000331163 CYP2F1P24903 491 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ELF1P32519 619 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ADCY8P40145 1251 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 IKBKEQ14164 716 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 TTMPQ5BVD1 217 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 PRSS55Q6UWB4 352 aaPredicted RBP16.65■□□□□ 0.26
PDGFB-201ENST00000331163 PIGZQ86VD9 579 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 C3orf58Q8NDZ4 430 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ZIM3Q96PE6 472 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 SCINQ9Y6U3 715 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 TTI1O43156 1089 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ECHDC2Q86YB7 292 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 GOLGA4Q13439 2230 aaKnown RBP16.65■□□□□ 0.26
PDGFB-201ENST00000331163 RLFQ13129 1914 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ODC1P11926 461 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ADCY1Q08828 1119 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 IRF5Q13568 498 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ASTE1Q2TB18 679 aaPredicted RBP16.65■□□□□ 0.26
PDGFB-201ENST00000331163 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
PDGFB-201ENST00000331163 RNF139Q8WU17 664 aa16.65■□□□□ 0.26
PDGFB-201ENST00000331163 ABLIM1O14639 778 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 CARSP49589 748 aaKnown RBP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 CEP85LQ5SZL2 805 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 KDELC2Q7Z4H8 507 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 CD302Q8IX05 232 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 N4BP2L2Q92802 583 aaPredicted RBP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 ZSWIM1Q9BR11 485 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 CEP41Q9BYV8 373 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 GOLGA8KD6RF30 607 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 CILPO75339 1184 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 ERBB2P04626 1255 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms