RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C2CD2LO14523 706 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 ABLIM1O14639 778 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 TM9SF1O15321 606 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 TNNC2P02585 160 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 MTM1Q13496 603 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 SPDYAQ5MJ70 313 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 CDCA2Q69YH5 1023 aaPredicted RBP16.08■□□□□ 0.17
BRCC3-201ENST00000330045 NLRP9Q7RTR0 991 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 RFX6Q8HWS3 928 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 ZBTB8OSQ8IWT0 167 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 EMC1Q8N766 993 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 RNF149Q8NC42 400 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 CHST13Q8NET6 341 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 DCAKDQ8WVC6 231 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 ALKBH8Q96BT7 664 aaKnown RBP16.08■□□□□ 0.17
BRCC3-201ENST00000330045 ZNF570Q96NI8 536 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 ZNF408Q9H9D4 720 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 XPO7Q9UIA9 1087 aaKnown RBP16.08■□□□□ 0.17
BRCC3-201ENST00000330045 POLIQ9UNA4 740 aa16.08■□□□□ 0.17
BRCC3-201ENST00000330045 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 SMAPO00193 183 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 TMEM63AO94886 807 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 CBX6O95503 412 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 TROVE2P10155 538 aaKnown RBP eCLIP16.08■□□□□ 0.16
BRCC3-201ENST00000330045 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-201ENST00000330045 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 TAF1BQ53T94 588 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-201ENST00000330045 MAP1SQ66K74 1059 aaPredicted RBP16.08■□□□□ 0.16
BRCC3-201ENST00000330045 ZNF276Q8N554 614 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 BANPQ8N9N5 519 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 FAM71DQ8N9W8 422 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 ZNF398Q8TD17 642 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD36BP1Q96IX9 119 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 CPXM1Q96SM3 734 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 TBC1D10AQ9BXI6 508 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 SYNCQ9H7C4 482 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 METTL5Q9NRN9 209 aaKnown RBP16.08■□□□□ 0.16
BRCC3-201ENST00000330045 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 ZFP69BQ9UJL9 534 aa16.08■□□□□ 0.16
BRCC3-201ENST00000330045 GOLGA8RI6L899 631 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 ITGBL1O95965 494 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 GJA5P36382 358 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 IREB2P48200 963 aaKnown RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 CCNG1P51959 295 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 OSTNP61366 133 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 BASP1P80723 227 aaKnown RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 USP50Q70EL3 339 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 LONP2Q86WA8 852 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 XYLT1Q86Y38 959 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 KIRREL3Q8IZU9 778 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 VPS11Q9H270 941 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 BATF3Q9NR55 127 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 WDR35Q9P2L0 1181 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 APOC2P02655 101 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 MXD4Q14582 209 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 SMYD5Q6GMV2 418 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 FAM13CQ8NE31 585 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 KLF6Q99612 283 aaPredicted RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 C12orf65Q9H3J6 166 aaKnown RBP16.07■□□□□ 0.16
BRCC3-201ENST00000330045 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 SLC17A7Q9P2U7 560 aa16.07■□□□□ 0.16
BRCC3-201ENST00000330045 TRAFD1O14545 582 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MCF2LO15068 1137 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 KRT19P08727 400 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 RBP3P10745 1247 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 TSHRP16473 764 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 DPYSL3Q14195 570 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 LBX2Q6XYB7 198 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MTDHQ86UE4 582 aaKnown RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 LRRC71Q8N4P6 559 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 HSPH1Q92598 858 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 OPTNQ96CV9 577 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 CYTH2Q99418 400 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MANSC1Q9H8J5 431 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 RNPEPL1Q9HAU8 725 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 B4GALT4O60513 344 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 RNF8O76064 485 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 ERBB2P04626 1255 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MARK3P27448 753 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 EPHB2P29323 1055 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MIPP30301 263 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 CDH8P55286 799 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 TAF5Q15542 800 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 C2orf40Q9H1Z8 148 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms