RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PGLYRP2Q96PD5 576 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 WDR24Q96S15 920 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 NIF3L1Q9GZT8 377 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 NOTCH4Q99466 2003 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 ODC1P11926 461 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 ATF2P15336 505 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 PRLRP16471 622 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 CDR2Q01850 454 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 TCEAL1Q15170 157 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 TRIM72Q6ZMU5 477 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 OSTM1Q86WC4 334 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 SLC35F6Q8N357 371 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 ATAD1Q8NBU5 361 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 ST13P5Q8NFI4 369 aaPredicted RBP17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 EPS8L1Q8TE68 723 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 RIPOR3Q96MK2 946 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 ZDHHC7Q9NXF8 308 aa17.43■□□□□ 0.38
PDLIM1-201ENST00000329399 WDFY4Q6ZS81 3184 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 ANKRD62A6NC57 917 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 RCCD1A6NED2 376 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 RTN2O75298 545 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 LRRN2O75325 713 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 URI1O94763 535 aaPredicted RBP17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 TMEM253P0C7T8 217 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 USP8P40818 1118 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 SOWAHAQ2M3V2 549 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 PPM1LQ5SGD2 360 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 LIMS2Q7Z4I7 341 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 GRASPQ7Z6J2 395 aaPredicted RBP17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 LRRC52Q8N7C0 313 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 HPDLQ96IR7 371 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 ISCUQ9H1K1 167 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 CYP3A43Q9HB55 503 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 CYP4F11Q9HBI6 524 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 TMLHEQ9NVH6 421 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 GDAP2Q9NXN4 497 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 MUTYHQ9UIF7 546 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 SLC27A5Q9Y2P5 690 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 NME7Q9Y5B8 376 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 SNX9Q9Y5X1 595 aa17.42■□□□□ 0.38
PDLIM1-201ENST00000329399 RIOK3O14730 519 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 SOAT2O75908 522 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 SLU7O95391 586 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 CPB1P15086 417 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 CYP11B1P15538 503 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 MYL6P60660 151 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 ZNF699Q32M78 642 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 SV2CQ496J9 727 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 TCEAL8Q8IYN2 117 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 CTNNBL1Q8WYA6 563 aaPredicted RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 TRIM11Q96F44 468 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 NECTIN4Q96NY8 510 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 MYADMQ96S97 322 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 XYLT2Q9H1B5 865 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 DNMT3BQ9UBC3 853 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 AFF4Q9UHB7 1163 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 NOCTQ9UK39 431 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 DOCK8Q8NF50 2099 aa17.41■□□□□ 0.38
PDLIM1-201ENST00000329399 TSC2P49815 1807 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 CYP26A1O43174 497 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 KRT5P13647 590 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 HADHBP55084 474 aaKnown RBP17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 DUSP4Q13115 394 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 GPR17Q13304 367 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 ZNF667Q5HYK9 610 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 LIN9Q5TKA1 542 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 PAPD7Q5XG87 772 aaKnown RBP17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 SYCE1Q8N0S2 351 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 KBTBD7Q8WVZ9 684 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 ZNF560Q96MR9 790 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 PI4K2AQ9BTU6 479 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 IRX2Q9BZI1 471 aaPredicted RBP17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 ZCWPW1Q9H0M4 648 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 SMOC2Q9H3U7 446 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 LIMD1Q9UGP4 676 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 DPP7Q9UHL4 492 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 CDC23Q9UJX2 597 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
PDLIM1-201ENST00000329399 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 MTMR11A4FU01 709 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 OR6C75A6NL08 312 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 ATP2C2O75185 946 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 ASGR2P07307 311 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 HNRNPA1P09651 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 LMO2P25791 158 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 PNPLA4P41247 253 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 SLC39A12Q504Y0 691 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 TPGS2Q68CL5 300 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 CEP112Q8N8E3 955 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 ITFG1Q8TB96 612 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 KAT5Q92993 513 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms