RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 MED26O95402 600 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TMEM253P0C7T8 217 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 GHRP10912 638 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 YY1P25490 414 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TSC22D1Q15714 1073 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 SEL1L3Q68CR1 1132 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 FAM20AQ96MK3 541 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 EURLQ9NYK6 297 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 R3HDM2Q9Y2K5 976 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 DCTN2Q13561 401 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 EML3Q32P44 896 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 DENND1BQ6P3S1 775 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 CHST12Q9NRB3 414 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 TJP2Q9UDY2 1190 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 USP39Q53GS9 565 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 DMGDHQ9UI17 866 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 IDH3BO43837 385 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 ASNSP08243 561 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 CCT8P50990 548 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 HPCAP84074 193 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 ARF5P84085 180 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 ERLEC1Q96DZ1 483 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 ZFRQ96KR1 1074 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PPCSQ9HAB8 311 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PSMD11O00231 422 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 CLOCKO15516 846 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 HS6ST1O60243 411 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 YWHABP31946 246 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 TRIM32Q13049 653 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 DGUOKQ16854 277 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 EPS8L2Q9H6S3 715 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 ABCB10Q9NRK6 738 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 IARS2Q9NSE4 1012 aaKnown RBP17.03■□□□□ 0.32
SMAD3-201ENST00000327367 CTNNAL1Q9UBT7 734 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 RNF112Q9ULX5 631 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 IRF1P10914 325 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 RRM2P31350 389 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PEX5P50542 639 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 MROH7Q68CQ1 1323 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 RIBC2Q9H4K1 309 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
SMAD3-201ENST00000327367 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 EPHX4Q8IUS5 362 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 FAM81AQ8TBF8 368 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD3-201ENST00000327367 EHD3Q9NZN3 535 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 GLRA3O75311 464 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 TGM2P21980 687 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 PODNQ7Z5L7 613 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 GORASP1Q9BQQ3 440 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 COPG2Q9UBF2 871 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 GTF2H1P32780 548 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 ORC1Q13415 861 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 KCNT1Q5JUK3 1230 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 TMEM143Q96AN5 459 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 ADAM30Q9UKF2 790 aa17.02■□□□□ 0.32
SMAD3-201ENST00000327367 AP5Z1O43299 807 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 SPAG6O75602 509 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 TFRCP02786 760 aaKnown RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 EIF2S1P05198 315 aaKnown RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 IFI35P80217 286 aaPredicted RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 DDR2Q16832 855 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 CLEC16AQ2KHT3 1053 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 TRMT5Q32P41 509 aaKnown RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 KBTBD12Q3ZCT8 623 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 A0A1W2PQJ5 194 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 EME2A4GXA9 379 aaPredicted RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 PECAM1P16284 738 aaPredicted RBP17.02■□□□□ 0.31
SMAD3-201ENST00000327367 QRICH1Q2TAL8 776 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 ATP6AP1LQ52LC2 224 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 KIFC1Q9BW19 673 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 FBXO40Q9UH90 709 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 DUSP12Q9UNI6 340 aa17.02■□□□□ 0.31
SMAD3-201ENST00000327367 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
SMAD3-201ENST00000327367 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 ATG7O95352 703 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 PTGER2P43116 358 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 DGKDQ16760 1214 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 RGS21Q2M5E4 152 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 KLHDC7AQ5VTJ3 777 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 ZNF333Q96JL9 665 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 EIF3LQ9Y262 564 aaKnown RBP17.01■□□□□ 0.31
SMAD3-201ENST00000327367 SLC30A1Q9Y6M5 507 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 LOC100506127A0A0U1RQW1 187 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 SNRNP35Q16560 246 aaKnown RBP17.01■□□□□ 0.31
SMAD3-201ENST00000327367 FUKQ8N0W3 1084 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 WWOXQ9NZC7 414 aa17.01■□□□□ 0.31
SMAD3-201ENST00000327367 APBA3O96018 575 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms