RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 KRT84Q9NSB2 600 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 EVA1BQ9NVM1 165 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 ZDHHC9Q9Y397 364 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 LMTK2Q8IWU2 1503 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 TEX28O15482 410 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 ZSCAN9O15535 394 aaPredicted RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 CHRNB3Q05901 458 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 LBRQ14739 615 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 EFHC1Q5JVL4 640 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SLC27A3Q5K4L6 730 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PPIL6Q8IXY8 311 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 ASB14A6NK59 587 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PI4K2BG5E9Z4 385 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PABPC1P11940 636 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 GCLMP48507 274 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 FMO5P49326 533 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PLOD1Q02809 727 aaPredicted RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 DCTN2Q13561 401 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 PTPRN2Q92932 1015 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 COA7Q96BR5 231 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 TBCBQ99426 244 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 ZNF408Q9H9D4 720 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 TMEM161AQ9NX61 479 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 RBAKQ9NYW8 714 aaPredicted RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 QSOX1O00391 747 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SETD1AO15047 1707 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 PLEKHA8P1O95397 391 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 KCNK10P57789 538 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 TSNQ15631 228 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SPATA18Q8TC71 538 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 DIS3LQ8TF46 1054 aaKnown RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 ASZ1Q8WWH4 475 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 HAVCR1Q96D42 359 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PLA2G12BQ9BX93 195 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PRDM8Q9NQV8 689 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 CNGB3Q9NQW8 809 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SH3BP4Q9P0V3 963 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 POLG2Q9UHN1 485 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 AFF2P51816 1311 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 LOC102724428A0A0B4J2F2 783 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 USP17L3A6NCW0 530 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 USP17L4A6NCW7 530 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 IL12AP29459 219 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SIK1P57059 783 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 SMIM11AP58511 58 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 HIST2H2ACQ16777 129 aaPredicted RBP6.56□□□□□ -1.36
SSH1-202ENST00000326495 HIST2H2AA3Q6FI13 130 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 BHLHB9Q6PI77 547 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 USP17L1Q7RTZ2 530 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 JAMLQ86YT9 394 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 PIK3C3Q8NEB9 887 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 EMSYQ7Z589 1322 aa6.56□□□□□ -1.36
SSH1-202ENST00000326495 AKAP5P24588 427 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 TPI1P60174 286 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 ZNF568Q3ZCX4 644 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 ZNF662Q6ZS27 426 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 REPS1Q96D71 796 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DGCR14Q96DF8 476 aaKnown RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 HEMGNQ9BXL5 484 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 TRIM39Q9HCM9 518 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 FER1L6Q2WGJ9 1857 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 TRIM49P0CI25 452 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 TRIM49CP0CI26 452 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 GRIK1P39086 918 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 MYO1HQ8N1T3 1032 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 RBBP8NLQ8NC74 664 aaPredicted RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 TMIEQ8NEW7 156 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 ASIC4Q96FT7 647 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 VAT1Q99536 393 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 OSBPL10Q9BXB5 764 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 KCND1Q9NSA2 647 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 RABGEF1Q9UJ41 708 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 TUBE1Q9UJT0 475 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 PCDHA6Q9UN73 950 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 SYNCRIPO60506 623 aaKnown RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 GLRA3O75311 464 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 ERCC2P18074 760 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 OR6P1Q8NGX9 317 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 PIGOQ8TEQ8 1089 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 E2F7Q96AV8 911 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 A0A088AWK7 358 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 TUBAL3A6NHL2 446 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DDHD2O94830 711 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 DLGAP3O95886 979 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 ZNF10P21506 573 aaPredicted RBP6.55□□□□□ -1.36
SSH1-202ENST00000326495 ZNF235Q14590 738 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 BLOC1S5Q8TDH9 187 aa6.55□□□□□ -1.36
SSH1-202ENST00000326495 C17orf80Q9BSJ5 609 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms