RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 LIG3P49916 1009 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 GATMP50440 423 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 WNT7BP56706 349 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 DHX34Q14147 1143 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 WDR93Q6P2C0 686 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
LIN28A-202ENST00000326279 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 AGAP3Q96P47 875 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
LIN28A-202ENST00000326279 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ODC1P11926 461 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ADIGQ0VDE8 80 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 IKBKEQ14164 716 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 TFDP2Q14188 446 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 LRRC8DQ7L1W4 858 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 C7orf61Q8IZ16 206 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 SPATA18Q8TC71 538 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 MORC4Q8TE76 937 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 NTPCRQ9BSD7 190 aaKnown RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 PTPRJQ12913 1337 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 M0QYT0 321 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 CABYRO75952 493 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 GBP1P32455 592 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 PHBP35232 272 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 RTP1P59025 263 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 MOGSQ13724 837 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 SSC5DA1L4H1 1573 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ZMYM2Q9UBW7 1377 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 APRTP07741 180 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 RARAP10276 462 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 PIGHQ14442 188 aaPredicted RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 CENPUQ71F23 418 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 CALR3Q96L12 384 aaKnown RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 ISCUQ9H1K1 167 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 FZD8Q9H461 694 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 CPSF3Q9UKF6 684 aaKnown RBP13.76□□□□□ -0.21
LIN28A-202ENST00000326279 MYH10P35580 1976 aa13.76□□□□□ -0.21
LIN28A-202ENST00000326279 LGR5O75473 907 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ENDOD1O94919 500 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 CA4P22748 312 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 HSD17B3P37058 310 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 TKTL1P51854 596 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ITGA8P53708 1063 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 AP1B1Q10567 949 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 MORN1Q5T089 497 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 FAM71DQ8N9W8 422 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 KAT2BQ92831 832 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 GOLGA8RI6L899 631 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 KCNN4O15554 427 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 MICAL2O94851 1124 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 PROSCO94903 275 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 CPP00450 1065 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 MXRA7P84157 204 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
LIN28A-202ENST00000326279 C10orf120Q5SQS8 335 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 RCOR2Q8IZ40 523 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ATAD1Q8NBU5 361 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 SNF8Q96H20 258 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 FGD4Q96M96 766 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
LIN28A-202ENST00000326279 COLEC11Q9BWP8 271 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 HMGXB4Q9UGU5 601 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 STAP1Q9ULZ2 295 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 A0A1W2PQ45 241 aaPredicted RBP13.75□□□□□ -0.21
LIN28A-202ENST00000326279 A0A1W2PQY0 241 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 ATG7O95352 703 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 CFHP08603 1231 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 USP17L7P0C7H9 530 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 LMO2P25791 158 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 MCL1Q07820 350 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 FAM47EQ6ZV65 393 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 CCDC110Q8TBZ0 833 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
LIN28A-202ENST00000326279 RXFP2Q8WXD0 754 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 COG5Q9UP83 839 aa13.75□□□□□ -0.21
LIN28A-202ENST00000326279 MAP1BP46821 2468 aaKnown RBP13.75□□□□□ -0.21
LIN28A-202ENST00000326279 A0A0A6YYK5 440 aaPredicted RBP13.74□□□□□ -0.21
LIN28A-202ENST00000326279 ASS1P00966 412 aaKnown RBP13.74□□□□□ -0.21
LIN28A-202ENST00000326279 MSH2P43246 934 aa13.74□□□□□ -0.21
LIN28A-202ENST00000326279 SARNPP82979 210 aaKnown RBP13.74□□□□□ -0.21
LIN28A-202ENST00000326279 DEUP1Q05D60 604 aa13.74□□□□□ -0.21
LIN28A-202ENST00000326279 DMTNQ08495 405 aa13.74□□□□□ -0.21
LIN28A-202ENST00000326279 TARBP2Q15633 366 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms