RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 CD300LGQ6UXG3 332 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 JAMLQ86YT9 394 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 CCDC50Q8IVM0 306 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 FUKQ8N0W3 1084 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 MREGQ8N565 214 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 RNF169Q8NCN4 708 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 KHSRPQ92945 711 aaKnown RBP eCLIP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 CASTOR2A6NHX0 329 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TJP3O95049 919 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 PARNO95453 639 aaKnown RBP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 POMCP01189 267 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 KRT1P04264 644 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 PDGFRAP16234 1089 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 ADORA2BP29275 332 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 RGS7P49802 495 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TIGD5Q53EQ6 642 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TTC27Q6P3X3 843 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 DRICH1Q6PGQ1 229 aaPredicted RBP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 SPOCD1Q6ZMY3 1216 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 EMC1Q8N766 993 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 CMASQ8NFW8 434 aaPredicted RBP18.74■□□□□ 0.59
RAB39A-201ENST00000320578 GRK7Q8WTQ7 553 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 RXFP2Q8WXD0 754 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 LINC01599Q8WXQ3 324 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 RSPH1Q8WYR4 309 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 APBB2Q92870 758 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 DCLK3Q9C098 648 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TMEM161AQ9NX61 479 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 NFU1Q9UMS0 254 aa18.74■□□□□ 0.59
RAB39A-201ENST00000320578 TMEM189-UBE2V1I3L0A0 370 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 TCF4P15884 667 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 NPR3P17342 541 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 TYMPP19971 482 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 PTPN9P43378 593 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 DSC1Q08554 894 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 GPS2Q13227 327 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 SMC1AQ14683 1233 aaKnown RBP18.73■□□□□ 0.59
RAB39A-201ENST00000320578 PLEKHG4Q58EX7 1191 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 ODF2Q5BJF6 829 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 TFDP3Q5H9I0 405 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 PAQR9Q6ZVX9 377 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 METTL23Q86XA0 190 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 URGCPQ8TCY9 931 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 IFT81Q8WYA0 676 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 SUSD3Q96L08 255 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 LPIN3Q9BQK8 851 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 SYT15Q9BQS2 421 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 ACBD6Q9BR61 282 aa18.73■□□□□ 0.59
RAB39A-201ENST00000320578 FRMD8P1Q9BZ68 369 aaPredicted RBP18.73■□□□□ 0.59
RAB39A-201ENST00000320578 ESYT3A0FGR9 886 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 B3GAT3O94766 335 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 TRUB2O95900 331 aaKnown RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 TKTP29401 623 aaKnown RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 ECHS1P30084 290 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 CDKN2BP42772 138 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 ATP13A4Q4VNC1 1196 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 NOMO2Q5JPE7 1267 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 EFHC1Q5JVL4 640 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 MFSD7Q6UXD7 560 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 SND1Q7KZF4 910 aaKnown RBP eCLIP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 VSIG1Q86XK7 387 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 CCDC105Q8IYK2 499 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 MYCBPAPQ8TBZ2 947 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 DEFB118Q96PH6 123 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 CRTAC1Q9NQ79 661 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 hCG_1818297A0A087WSY0 165 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 C3orf70A6NLC5 250 aaPredicted RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 CCL5P13501 91 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 IGFBP6P24592 240 aaPredicted RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 MIPP30301 263 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 FLT3P36888 993 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 TNNT3P45378 269 aaPredicted RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 KIAA0319Q5VV43 1072 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 TRNP1Q6NT89 227 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 SCUBE3Q8IX30 993 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 GSPT2Q8IYD1 628 aaKnown RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 ATL2Q8NHH9 583 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 RAPGEF5Q92565 580 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 RNF25Q96BH1 459 aaPredicted RBP18.72■□□□□ 0.59
RAB39A-201ENST00000320578 TBCBQ99426 244 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 PAAF1Q9BRP4 392 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 HERPUD2Q9BSE4 406 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 USP18Q9UMW8 372 aa18.72■□□□□ 0.59
RAB39A-201ENST00000320578 NBNO60934 754 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 ATP2C2O75185 946 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 ENDOD1O94919 500 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 ECEL1O95672 775 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 FAM200BP0CF97 657 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 IL1R2P27930 398 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 SDC4P31431 198 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 LMNB2Q03252 620 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 GPNMBQ14956 572 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 CCDC14Q49A88 953 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 BOLA3Q53S33 107 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 TXNRD3NBQ6F5E7 133 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 FAM171BQ6P995 826 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 ANKRD33Q7Z3H0 272 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms