RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 SPATA16Q9BXB7 569 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 ZNF341Q9BYN7 854 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 HAPLN2Q9GZV7 340 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 SYNCQ9H7C4 482 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 PPM1HQ9ULR3 514 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 HNRNPRO43390 633 aaKnown RBP16.77■□□□□ 0.27
CRAT-201ENST00000318080 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.27
CRAT-201ENST00000318080 OASLQ15646 514 aaKnown RBP16.77■□□□□ 0.27
CRAT-201ENST00000318080 SPOCD1Q6ZMY3 1216 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 SYTL5Q8TDW5 730 aaPredicted RBP16.77■□□□□ 0.27
CRAT-201ENST00000318080 USP6NLQ92738 828 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 CEP170P1Q96L14 293 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 MCEEQ96PE7 176 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 NMUR2Q9GZQ4 415 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 BLOC1S6Q9UL45 172 aa16.77■□□□□ 0.27
CRAT-201ENST00000318080 MEI4A8MW99 385 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 KITP10721 976 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 USP46P62068 366 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 SEPT7Q16181 437 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 FYB2Q5VWT5 728 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 C3orf62Q6ZUJ4 267 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 RAPH1Q70E73 1250 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 EFCAB3Q8N7B9 438 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 TRIM11Q96F44 468 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 PAFAH2Q99487 392 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 KCNK13Q9HB14 408 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 ANKFY1Q9P2R3 1169 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 MARCOQ9UEW3 520 aaPredicted RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 TESPA1A2RU30 521 aaPredicted RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 B2RBV5 119 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 LMNAP02545 664 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 C4BPAP04003 597 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 MAGEA8P43361 318 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 ARFIP2P53365 341 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 SLC18A1P54219 525 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 ARL4CP56559 192 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 GEMIN4P57678 1058 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 SMTNL2Q2TAL5 461 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 WDR44Q5JSH3 913 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 EFHC2Q5JST6 749 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 ARMCX6Q7L4S7 300 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 HIPK4Q8NE63 616 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 CFAP61Q8NHU2 1237 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 MZB1Q8WU39 189 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 TTC17Q96AE7 1141 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 TTC25Q96NG3 672 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 SENP7Q9BQF6 1050 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 GALNT8Q9NY28 637 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 CLIC5Q9NZA1 410 aa16.76■□□□□ 0.27
CRAT-201ENST00000318080 STX18Q9P2W9 335 aaKnown RBP16.76■□□□□ 0.27
CRAT-201ENST00000318080 OPHN1O60890 802 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 BGNP21810 368 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 GTF2H1P32780 548 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 EPHX2P34913 555 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 VCPP55072 806 aaKnown RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 CUL2Q13617 745 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 MORF4L2Q15014 288 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 ZACNQ401N2 412 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 KCNT1Q5JUK3 1230 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 CENPUQ71F23 418 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 TREML1Q86YW5 311 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 RHPN2Q8IUC4 686 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 APOBEC3FQ8IUX4 373 aaKnown RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 ARHGEF4Q9NR80 690 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 hCG_1818297A0A087WSY0 165 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 GLTPD2A6NH11 291 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 CREB3O43889 395 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 ICAM1P05362 532 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 TPP2P29144 1249 aaPredicted RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 RPS6P62753 249 aaKnown RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 TMEM62Q0P6H9 643 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 HIF1AQ16665 826 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 LPCAT4Q643R3 524 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 SATL1Q86VE3 508 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 IGDCC3Q8IVU1 814 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 RCOR2Q8IZ40 523 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 CPT1BQ92523 772 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 OPTNQ96CV9 577 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 THTPAQ9BU02 230 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 ASCC2Q9H1I8 757 aaPredicted RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 MANSC1Q9H8J5 431 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 MRPL47Q9HD33 250 aaKnown RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
CRAT-201ENST00000318080 XPNPEP1Q9NQW7 623 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 GABBR1Q9UBS5 961 aa16.75■□□□□ 0.27
CRAT-201ENST00000318080 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
CRAT-201ENST00000318080 ZSCAN9O15535 394 aaPredicted RBP16.74■□□□□ 0.27
CRAT-201ENST00000318080 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
CRAT-201ENST00000318080 TROVE2P10155 538 aaKnown RBP eCLIP16.74■□□□□ 0.27
CRAT-201ENST00000318080 MYL2P10916 166 aa16.74■□□□□ 0.27
CRAT-201ENST00000318080 MYBPC3Q14896 1274 aa16.74■□□□□ 0.27
CRAT-201ENST00000318080 RIPOR1Q6ZS17 1223 aa16.74■□□□□ 0.27
CRAT-201ENST00000318080 ENOSF1Q7L5Y1 443 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms