RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 INTS9Q9NV88 658 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 ATP11BQ9Y2G3 1177 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 MKI67P46013 3256 aaKnown RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 TJP3O95049 919 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 TTC4O95801 387 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 NFICP08651 508 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 CD58P19256 250 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 SLCO1A2P46721 670 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 PPARDQ03181 441 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 PIGHQ14442 188 aaPredicted RBP14.92□□□□□ -0.02
VRK3-201ENST00000316763 TNFAIP8L3Q5GJ75 292 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 UBXN11Q5T124 520 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 SCARA3Q6AZY7 606 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 C6orf89Q6UWU4 347 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 TOX2Q96NM4 488 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 CCDC77Q9BR77 488 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 AAASQ9NRG9 546 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 C2CD2Q9Y426 696 aa14.92□□□□□ -0.02
VRK3-201ENST00000316763 ACSL3O95573 720 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 DRD4P21917 467 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
VRK3-201ENST00000316763 THPOP40225 353 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 ZNF699Q32M78 642 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 DAB2IPQ5VWQ8 1189 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 JADE1Q6IE81 842 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 ERICH1Q86X53 443 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 CXorf38Q8TB03 319 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 DDX23Q9BUQ8 820 aaKnown RBP14.91□□□□□ -0.02
VRK3-201ENST00000316763 DDX56Q9NY93 547 aaKnown RBP14.91□□□□□ -0.02
VRK3-201ENST00000316763 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 NEU2Q9Y3R4 380 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 ALPK3Q96L96 1907 aa14.91□□□□□ -0.02
VRK3-201ENST00000316763 NDC80O14777 642 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 TP73O15350 636 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 MED7O43513 233 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 FSBPO95073 299 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 KRT1P04264 644 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 CTSHP09668 335 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 POLR2BP30876 1174 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 CHKAP35790 457 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 IZUMO3Q5VZ72 239 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ALKAL1Q6UXT8 129 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 P3H4Q92791 437 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 XYLT2Q9H1B5 865 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ADAM7Q9H2U9 754 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 NXF3Q9H4D5 531 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 SNTG2Q9NY99 539 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 SIX4Q9UIU6 781 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ST3GAL5Q9UNP4 418 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 O00370 1275 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 TCEA3O75764 348 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 CDH5P33151 784 aaPredicted RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 VPS41P49754 854 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 RPL7AP62424 266 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 TMEM132DQ14C87 1099 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 QPCTQ16769 361 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 UBAP2Q5T6F2 1119 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 DRICH1Q6PGQ1 229 aaPredicted RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 C1orf127Q8N9H9 656 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 SNX27Q96L92 541 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 NSRP1Q9H0G5 558 aaKnown RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 CCDC134Q9H6E4 229 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ACTR5Q9H9F9 607 aaPredicted RBP14.9□□□□□ -0.02
VRK3-201ENST00000316763 CHST12Q9NRB3 414 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 DERAQ9Y315 318 aa14.9□□□□□ -0.02
VRK3-201ENST00000316763 ANK1P16157 1881 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 GOLGA6L7A0A1B0GV03 622 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 H0YHG0 523 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 GJB6O95452 261 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 CKBP12277 381 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 PTPN7P35236 360 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 LONRF1Q17RB8 773 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 ZNF394Q53GI3 561 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 RELL1Q8IUW5 271 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 ANKS4BQ8N8V4 417 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 TRIM6Q9C030 488 aaPredicted RBP14.89□□□□□ -0.03
VRK3-201ENST00000316763 HES2Q9Y543 173 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 CAPN7Q9Y6W3 813 aa14.89□□□□□ -0.03
VRK3-201ENST00000316763 TCRBV5S1A1TA0A578 114 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 LIASO43766 372 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 WEE2P0C1S8 567 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ATF7P17544 494 aaPredicted RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
VRK3-201ENST00000316763 ZBTB6Q15916 424 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 KYNUQ16719 465 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 XKR4Q5GH76 650 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 ZNF618Q5T7W0 954 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 KAZNQ674X7 775 aa14.88□□□□□ -0.03
VRK3-201ENST00000316763 SPOCD1Q6ZMY3 1216 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms