RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 UROC1Q96N76 676 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 TMEM209Q96SK2 561 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 IP6K2Q9UHH9 426 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 AMACRQ9UHK6 382 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 PCDHB7Q9Y5E2 793 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
CALR-201ENST00000316448 TCRBV7S2A1N4TA0A589 114 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 H3BQF6 201 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 PAPSS1O43252 624 aaPredicted RBP16.57■□□□□ 0.24
CALR-201ENST00000316448 CYP11A1P05108 521 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 SETSIPP0DME0 302 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 MAN1A1P33908 653 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 LHX1P48742 406 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
CALR-201ENST00000316448 LLGL1Q15334 1064 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 RAB6CQ53S08 254 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.57■□□□□ 0.247e-14■■■□□ 18.1
CALR-201ENST00000316448 MAATS1Q7Z4T9 603 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 ANKS1BQ7Z6G8 1248 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 ADAT2Q7Z6V5 191 aaKnown RBP16.57■□□□□ 0.24
CALR-201ENST00000316448 SCUBE3Q8IX30 993 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 CLEC4CQ8WTT0 213 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.24
CALR-201ENST00000316448 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 HERPUD2Q9BSE4 406 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 RAB6CQ9H0N0 254 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 NRDE2Q9H7Z3 1164 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 TMEM30AQ9NV96 361 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.57■□□□□ 0.24
CALR-201ENST00000316448 WDR35Q9P2L0 1181 aa16.57■□□□□ 0.24
CALR-201ENST00000316448 GRAP2O75791 330 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 OAS2P29728 719 aaKnown RBP16.56■□□□□ 0.24
CALR-201ENST00000316448 ECHS1P30084 290 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 CACNA2D1P54289 1103 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 BST2Q10589 180 aaKnown RBP16.56■□□□□ 0.24
CALR-201ENST00000316448 CUL1Q13616 776 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 CCDC26Q8TAB7 109 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 APBB2Q92870 758 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 SUSD3Q96L08 255 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 GDAP1L1Q96MZ0 367 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 ACBD3Q9H3P7 528 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 TTC3P53804 2025 aa16.56■□□□□ 0.24
CALR-201ENST00000316448 OR1G1P47890 313 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 BCAT1P54687 386 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 TAP1Q03518 808 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 GPS2Q13227 327 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 CYP1B1Q16678 543 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 OLFML1Q6UWY5 402 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.242e-21■■■■■ 37.3
CALR-201ENST00000316448 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 SLC13A5Q86YT5 568 aaPredicted RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 OR10T2Q8NGX3 314 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 URGCPQ8TCY9 931 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 NDRG1Q92597 394 aaKnown RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 DUSP16Q9BY84 665 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 MIS12Q9H081 205 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 C11orf49Q9H6J7 331 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 TMEM39AQ9NV64 488 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 NFU1Q9UMS0 254 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 PRG3Q9Y2Y8 225 aaPredicted RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 TANC1Q9C0D5 1861 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 TTI1O43156 1089 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 PSTPIP1O43586 416 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 PHF2O75151 1096 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 ODC1P11926 461 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 SIX1Q15475 284 aaPredicted RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 TRADDQ15628 312 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 SH3PXD2AQ5TCZ1 1133 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
CALR-201ENST00000316448 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 PKMYT1Q99640 499 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 RHOBTB2Q9BYZ6 727 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 CDH9Q9ULB4 789 aa16.55■□□□□ 0.24
CALR-201ENST00000316448 MKI67P46013 3256 aaKnown RBP16.54■□□□□ 0.24
CALR-201ENST00000316448 PSMA2P25787 234 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 FLT3P36888 993 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 RNASELQ05823 741 aaKnown RBP16.54■□□□□ 0.24
CALR-201ENST00000316448 DHX34Q14147 1143 aaKnown RBP16.54■□□□□ 0.24
CALR-201ENST00000316448 PKN2Q16513 984 aaKnown RBP16.54■□□□□ 0.24
CALR-201ENST00000316448 CLEC20AQ6ZU45 233 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 PIGZQ86VD9 579 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 NIPA2Q8N8Q9 360 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 ZMIZ2Q8NF64 920 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 SMOQ99835 787 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 KANSL3Q9P2N6 904 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 TSC2P49815 1807 aa16.54■□□□□ 0.24
CALR-201ENST00000316448 KIAA0100Q14667 2235 aaKnown RBP16.54■□□□□ 0.24
CALR-201ENST00000316448 TRIM43BA6NCK2 446 aa16.53■□□□□ 0.24
CALR-201ENST00000316448 C2CD4BA6NLJ0 364 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms