RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM150BA6NC51 233 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SRP72O76094 671 aaKnown RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 CYP3A4P08684 503 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 IFI35P80217 286 aaPredicted RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 RAD51Q06609 339 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ACCSLQ4AC99 568 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 C6orf10Q5SRN2 563 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 LINC00523Q86TU6 105 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 FAM83AQ86UY5 434 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ELMO3Q96BJ8 720 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 CCDC134Q9H6E4 229 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 DLGAP2Q9P1A6 1054 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 RHBDL3P58872 404 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 FOXR1Q6PIV2 292 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 SUGP1Q8IWZ8 645 aaKnown RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 EIF1ADQ8N9N8 165 aaKnown RBP14.3□□□□□ -0.12
SPAST-201ENST00000315285 RXFP2Q8WXD0 754 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 TMEM176AQ96HP8 235 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 VCPIP1Q96JH7 1222 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 NAT9Q9BTE0 207 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 RXFP1Q9HBX9 757 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 KIF17Q9P2E2 1029 aa14.3□□□□□ -0.12
SPAST-201ENST00000315285 ATRNO75882 1429 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 APOA4P06727 396 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 NNMTP40261 264 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 GRIK5Q16478 980 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 MTDHQ86UE4 582 aaKnown RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 RNF217Q8TC41 542 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 PGM2Q96G03 612 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ILKAPQ9H0C8 392 aaPredicted RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 ENO4A6NNW6 628 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 TADA2AO75478 443 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ZNF662Q6ZS27 426 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 C1orf186Q6ZWK4 172 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 SZRD1Q7Z422 152 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 CCDC33Q8N5R6 958 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 CYP3A43Q9HB55 503 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 DCDC2Q9UHG0 476 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 GAKO14976 1311 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 DNALI1O14645 258 aaPredicted RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 ANXA9O76027 345 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 UBTFL6P0CB48 400 aaPredicted RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 GHRP10912 638 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 BAP1Q92560 729 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 KIAA1683Q9H0B3 1180 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 AVENQ9NQS1 362 aaPredicted RBP14.29□□□□□ -0.12
SPAST-201ENST00000315285 TM9SF1O15321 606 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 MYO1DO94832 1006 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 PTK6Q13882 451 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 KRT33BQ14525 404 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 SLC30A9Q6PML9 568 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ELMOD1Q8N336 334 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 GALNT4Q8N4A0 578 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 SHCBP1Q8NEM2 672 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 CASS4Q9NQ75 786 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ARHGAP26Q9UNA1 814 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 WNT7AO00755 349 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 PGK2P07205 417 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 ACADSP16219 412 aa14.29□□□□□ -0.12
SPAST-201ENST00000315285 PMPCBO75439 489 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CXCL8P10145 99 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CYP2B6P20813 491 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 DDX50Q9BQ39 737 aaKnown RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 WDCPQ9H6R7 721 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 NINJ2Q9NZG7 142 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 ACO1P21399 889 aaKnown RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 NUDT2P50583 147 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 BCAT1P54687 386 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 LAMTOR4Q0VGL1 99 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 FLOT2Q14254 428 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 TTMPQ5BVD1 217 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 IL31Q6EBC2 164 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 GANQ9H2C0 597 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 SYF2O95926 243 aaKnown RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 IFNA8P32881 189 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 SLC26A2P50443 739 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 FBXO16Q8IX29 292 aaPredicted RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 MMTAG2Q9BU76 263 aaKnown RBP14.28□□□□□ -0.12
SPAST-201ENST00000315285 PKD2L2Q9NZM6 624 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CCL15-CCL14A0A0B4J2E2 113 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 TISP43B9A030 160 aa14.28□□□□□ -0.12
SPAST-201ENST00000315285 CALB2P22676 271 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms