RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 WDR49Q8IV35 697 aa19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 GGA2Q9UJY4 613 aa19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 SNRPAP09012 282 aaKnown RBP19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 RPL22P35268 128 aaKnown RBP19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 GARSP41250 739 aaKnown RBP19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 MPZL3Q6UWV2 235 aa19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 FAM172AQ8WUF8 416 aa19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 ZFATQ9P243 1243 aa19.17■□□□□ 0.66
CDK5R1-201ENST00000313401 ENTPD5O75356 428 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 UPP2O95045 317 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SLC1A5Q15758 541 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 C2orf71A6NGG8 1288 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 NEMP1O14524 444 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 STX3Q13277 289 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SLC39A4Q6P5W5 647 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 UNC45BQ8IWX7 931 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 E2F7Q96AV8 911 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SIK2Q9H0K1 926 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■■□□□ 13
CDK5R1-201ENST00000313401 SHOC2Q9UQ13 582 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 FNDC3AQ9Y2H6 1198 aaKnown RBP19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SRRM3A6NNA2 597 aaPredicted RBP19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 RBP5P82980 135 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SEPT6Q14141 434 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 C1orf220Q5T0J3 134 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 FAM131BQ86XD5 332 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 EXOC8Q8IYI6 725 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 SLC25A41Q8N5S1 370 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 TMEM120AQ9BXJ8 343 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 MYH1P12882 1939 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 CD48P09326 243 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 TNFAIP2Q03169 654 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 KIZQ2M2Z5 673 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 TLK1Q9UKI8 766 aa19.16■□□□□ 0.66
CDK5R1-201ENST00000313401 ZNF536O15090 1300 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 LYPLA2O95372 231 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 SMARCAD1Q9H4L7 1026 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 TJP2Q9UDY2 1190 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 STRCP1A6NGW2 1772 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 TAC1P20366 129 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 PREPLQ4J6C6 727 aaPredicted RBP19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 VSTM1Q6UX27 236 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 DENND5BQ6ZUT9 1274 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 PRPF39Q86UA1 669 aaKnown RBP19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 TRABD2AQ86V40 505 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 ECHDC2Q86YB7 292 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 CCNYL1Q8N7R7 359 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 DNAJC9Q8WXX5 260 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 NSL1Q96IY1 281 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 ZNF317Q96PQ6 595 aaPredicted RBP19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 TUBB6Q9BUF5 446 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 PAK5Q9P286 719 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 C15orf41Q9Y2V0 281 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 GLI3P10071 1580 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 PAX7P23759 505 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 NDST1P52848 882 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 CRADDP78560 199 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 POU5F1Q01860 360 aaKnown RBP19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 XRCC4Q13426 336 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 DCAF6Q58WW2 860 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 MON1BQ7L1V2 547 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 APOL2Q9BQE5 337 aa19.15■□□□□ 0.66
CDK5R1-201ENST00000313401 C4BPAP04003 597 aaKnown RBP19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 CES3Q6UWW8 571 aa19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 ALKBH8Q96BT7 664 aaKnown RBP19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 HERPUD2Q9BSE4 406 aa19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 FBXO6Q9NRD1 293 aaPredicted RBP19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 SLC17A7Q9P2U7 560 aa19.14■□□□□ 0.66
CDK5R1-201ENST00000313401 MYPNQ86TC9 1320 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 E5RJQ4 531 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 NFICP08651 508 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 RARBP10826 455 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 KDELR1P24390 212 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 TAF5Q15542 800 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 ANKRD22Q5VYY1 191 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 ALLCQ8N6M5 410 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 USP33Q8TEY7 942 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 VCX3BQ9H321 246 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 hCG_1818297A0A087WSY0 165 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 KLRG2A4D1S0 409 aaPredicted RBP19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 SLC4A1P02730 911 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 UNGP13051 313 aaPredicted RBP19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 KCNA2P16389 499 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 MMP8P22894 467 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 FOXN2P32314 431 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 TWF2Q6IBS0 349 aaKnown RBP19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 TMEM176AQ96HP8 235 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 DLGAP2Q9P1A6 1054 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 TSPAN16Q9UKR8 245 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 TMEM191CA6NGB0 347 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 RASSF9O75901 435 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 RBL1P28749 1068 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 CDKL3Q8IVW4 592 aaPredicted RBP19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 C12orf29Q8N999 325 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 WWP1Q9H0M0 922 aa19.14■□□□□ 0.65
CDK5R1-201ENST00000313401 LACTBL1A8MY62 500 aa19.13■□□□□ 0.65
CDK5R1-201ENST00000313401 NVLO15381 856 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms