RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TUT1Q9H6E5 874 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 V9GYQ6 96 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 A0A0G2JLL6 359 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 ATP9BO43861 1147 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 MYO1DO94832 1006 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 DNAJC3Q13217 504 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PTK2BQ14289 1009 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 KRT33BQ14525 404 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ANGPT1Q15389 498 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ANO4Q32M45 955 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ANKRD40Q6AI12 368 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PSRC1Q6PGN9 363 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 MTHFD1LQ6UB35 978 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 NYAP1Q6ZVC0 841 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PRRT2Q7Z6L0 340 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 KLF6Q99612 283 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 IL1RL2Q9HB29 575 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 DAPK2Q9UIK4 370 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ZMYND8Q9ULU4 1186 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 KCPQ6ZWJ8 1503 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 GLI3P10071 1580 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 UBA6A0AVT1 1052 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 ZNF839A8K0R7 811 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 RGS5O15539 181 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 VGLL2Q8N8G2 317 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 TC2NQ8N9U0 490 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 RNF149Q8NC42 400 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 CELF4Q9BZC1 486 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 USE1Q9NZ43 259 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ITIH6Q6UXX5 1313 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 RGPD1P0DJD0 1748 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 AK9Q5TCS8 1911 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 RTN2O75298 545 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 FGBP02675 491 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 ELNP15502 786 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SLC9A1P19634 815 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 FXR1P51114 621 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS41-202ENST00000310301 COPAP53621 1224 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 RHBDL3P58872 404 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS41-202ENST00000310301 MKRN4PQ13434 485 aaPredicted RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 OASLQ15646 514 aaKnown RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 SLC18A3Q16572 532 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 JAMLQ86YT9 394 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 APPL2Q8NEU8 664 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 CATSPER2Q96P56 530 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 LXNQ9BS40 222 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 EMILIN2Q9BXX0 1053 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 TMEM51Q9NW97 253 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 XPO7Q9UIA9 1087 aaKnown RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 LRRC37A3O60309 1634 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 DNALI1O14645 258 aaPredicted RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 CAPN1P07384 714 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 ADCYAP1R1P41586 468 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 OTUD4Q01804 1114 aaKnown RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 MLLT1Q03111 559 aaPredicted RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 NR1I3Q14994 352 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 RAB30Q15771 203 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 CES5AQ6NT32 575 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 LAYNQ6UX15 382 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 CCDC149Q6ZUS6 474 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 TERB1Q8NA31 727 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 PDCD6IPQ8WUM4 868 aaKnown RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 OTUB1Q96FW1 271 aaPredicted RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 PARVAQ9NVD7 372 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SOX13Q9UN79 622 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 ITM2BQ9Y287 266 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SEPT4O43236 478 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 TRIM49P0CI25 452 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 TRIM49CP0CI26 452 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 IMPDH2P12268 514 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SDC4P31431 198 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 AP3M2P53677 418 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SESN2P58004 480 aaPredicted RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 OVGP1Q12889 678 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 SLC29A2Q14542 456 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 CHI3L2Q15782 390 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 ZNF699Q32M78 642 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 COBLL1Q53SF7 1204 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 C6orf10Q5SRN2 563 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 IZUMO2Q6UXV1 221 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 P3H2Q8IVL5 708 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 FAM213AQ9BRX8 229 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 KLHL4Q9C0H6 718 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 DCLRE1BQ9H816 532 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 AGPAT5Q9NUQ2 364 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 AIPL1Q9NZN9 384 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 AFF4Q9UHB7 1163 aaKnown RBP8.5□□□□□ -1.05
VPS41-202ENST00000310301 PCDHGB4Q9UN71 923 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 PLCH1Q4KWH8 1693 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 TMEM191CA6NGB0 347 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 PP2D1A8MPX8 630 aa8.5□□□□□ -1.05
VPS41-202ENST00000310301 M0QYV0 167 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms