RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PDGFRBP09619 1106 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 MCF2P10911 925 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 ZNF484Q5JVG2 852 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 FNBP1LQ5T0N5 605 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 FAM183BPQ6ZVS7 135 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 CNPY4Q8N129 248 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 SLC35B2Q8TB61 432 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 PITPNM3Q9BZ71 974 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 LHX5Q9H2C1 402 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 C12orf65Q9H3J6 166 aaKnown RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 KLC4Q9NSK0 619 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
PTPN2-201ENST00000309660 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
PTPN2-201ENST00000309660 PDHXO00330 501 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 UBOX5O94941 541 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 GPD2P43304 727 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 RBP5P82980 135 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 FBXO36Q8NEA4 188 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 P3H4Q92791 437 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 KCNN1Q92952 543 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CD248Q9HCU0 757 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 GPD1P21695 349 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 GBP2P32456 591 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 ARL4CP56559 192 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CCNA1P78396 465 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 IL9RQ01113 521 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 GRIK4Q16099 956 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 ZC3H12AQ5D1E8 599 aaKnown RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CKAP2Q8WWK9 683 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CPT1BQ92523 772 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 TTC25Q96NG3 672 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 OSMRQ99650 979 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 SLCO1B3Q9NPD5 702 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 BARX2Q9UMQ3 279 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 DRG1Q9Y295 367 aaKnown RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 MAGEB2O15479 319 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 TSPAN1O60635 241 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 VDRP11473 427 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 NEFHP12036 1026 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 KRT4P19013 534 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 AKAP5P24588 427 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 ADORA2BP29275 332 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 YWHAGP61981 247 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 MOGSQ13724 837 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 ZNF268Q14587 947 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CEP128Q6ZU80 1094 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 POLNQ7Z5Q5 900 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 PPIL6Q8IXY8 311 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 PDIK1LQ8N165 341 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 NIPA2Q8N8Q9 360 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
PTPN2-201ENST00000309660 ASB7Q9H672 318 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
PTPN2-201ENST00000309660 SYNJ2BP-COX16A0A087WUM0 186 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 AVILO75366 819 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 TMEM63AO94886 807 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 RPA3P35244 121 aaPredicted RBP12.08□□□□□ -0.48
PTPN2-201ENST00000309660 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 HHATQ5VTY9 493 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 PPP1R21Q6ZMI0 780 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC63Q8NA47 563 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 FBF1Q8TES7 1133 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 MRPL45Q9BRJ2 306 aaKnown RBP12.08□□□□□ -0.48
PTPN2-201ENST00000309660 COX16Q9P0S2 106 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 CCL15-CCL14A0A0B4J2E2 113 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
PTPN2-201ENST00000309660 CYP3A5P20815 502 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 FOXN2P32314 431 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
PTPN2-201ENST00000309660 ROR1Q01973 937 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 CCL15Q16663 113 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 CYB5D1Q6P9G0 228 aa12.08□□□□□ -0.48
PTPN2-201ENST00000309660 TRABD2AQ86V40 505 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms