RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 NR1D2Q14995 579 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 FAM9CQ8IZT9 166 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 OR6Y1Q8NGX8 325 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 DCAF4Q8WV16 495 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ANKRD36BP1Q96IX9 119 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CCDC138Q96M89 665 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CAAP1Q9H8G2 361 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 DDX28Q9NUL7 540 aaKnown RBP10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ARFGEF1Q9Y6D6 1849 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 PDGFRBP09619 1106 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 CCDC159P0C7I6 412 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ANPEPP15144 967 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GSTM4Q03013 218 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ITGA9Q13797 1035 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 MTFR1Q15390 333 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 TTC27Q6P3X3 843 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 ZNF720Q7Z2F6 126 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 TLCD1Q96CP7 247 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 MAGEB18Q96M61 343 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 GPRC5CQ9NQ84 441 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
MSRB3-201ENST00000308259 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 BTNL10A8MVZ5 291 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 MAN1A2O60476 641 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SORBS3O60504 671 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SGPL1O95470 568 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 EEF1DP29692 281 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 CXCL9Q07325 125 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PPP3CAQ08209 521 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ITGADQ13349 1161 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 KLHDC10Q6PID8 442 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 FOXR2Q6PJQ5 311 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 FNDC8Q8TC99 324 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 CKAP2Q8WWK9 683 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 FAM20AQ96MK3 541 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 LXNQ9BS40 222 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ZNF577Q9BSK1 485 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 STX18Q9P2W9 335 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ZNF70Q9UC06 446 aaPredicted RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 BCAP29Q9UHQ4 241 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ZNF229Q9UJW7 825 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 NENFQ9UMX5 172 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 FAM47DPA6NHR8 397 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 CHEK2O96017 543 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ENO2P09104 434 aaPredicted RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 KRT5P13647 590 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PMLP29590 882 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 STIP1P31948 543 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 RPL21P46778 160 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 LPCAT4Q643R3 524 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 STXBP4Q6ZWJ1 553 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 BTN2A1Q7KYR7 527 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 UBL4BQ8N7F7 174 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 POU5F2Q8N7G0 328 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ATP2A3Q93084 1043 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PWWP2AQ96N64 755 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 MRPL46Q9H2W6 279 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 ARMCX1Q9P291 453 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 UMODL1Q5DID0 1318 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 BTAF1O14981 1849 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 COMTP21964 271 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 POU5F1Q01860 360 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 RELAQ04206 551 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 MTMR2Q13614 643 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PPM1KQ8N3J5 372 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 WRNIP1Q96S55 665 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 FIZ1Q96SL8 496 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SYT17Q9BSW7 474 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 EPB41L4BQ9H329 900 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 PCDH12Q9NPG4 1184 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SCHIP1Q9P0W5 487 aaPredicted RBP10.9□□□□□ -0.66
MSRB3-201ENST00000308259 NYAP2Q9P242 653 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
MSRB3-201ENST00000308259 SLC16A3O15427 465 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CYP26A1O43174 497 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 KITP10721 976 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 VARSP26640 1264 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 PPATQ06203 517 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 AUHQ13825 339 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 WDR72Q3MJ13 1102 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 EGFLAMQ63HQ2 1017 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 FASTKD5Q7L8L6 764 aaKnown RBP10.89□□□□□ -0.67
MSRB3-201ENST00000308259 CPXCR1Q8N123 301 aa10.89□□□□□ -0.67
MSRB3-201ENST00000308259 C1orf54Q8WWF1 131 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms