RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 NME8Q8N427 588 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 MTMR14Q8NCE2 650 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 ARHGEF4Q9NR80 690 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 CSDE1O75534 798 aaKnown RBP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 VARSP26640 1264 aaKnown RBP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 SERPINB6P35237 376 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 RARRES1P49788 294 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 HSD17B4P51659 736 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 MSLNQ13421 630 aaPredicted RBP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 UBAP2LQ14157 1087 aaKnown RBP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 RIN3Q8TB24 985 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 INIPQ9NRY2 104 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 VILLO15195 856 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 RGS20O76081 388 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 ZWINTO95229 277 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 KRT10P13645 584 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 QARSP47897 775 aaKnown RBP16.95■□□□□ 0.3
CCDC8-201ENST00000307522 DCAF15Q66K64 600 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 RHOT2Q8IXI1 618 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 FAM111AQ96PZ2 611 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 MANSC1Q9H8J5 431 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 LGALS13Q9UHV8 139 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 ANAPC7Q9UJX3 599 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 ADAMTS6Q9UKP5 1117 aa16.95■□□□□ 0.3
CCDC8-201ENST00000307522 CAPN8A6NHC0 703 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 CIB2O75838 187 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 RARBP10826 455 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 MYL7Q01449 175 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 RALGPS1Q5JS13 557 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 ANKS1BQ7Z6G8 1248 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 PI4K2AQ9BTU6 479 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 USP29Q9HBJ7 922 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 CYLDQ9NQC7 956 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 AGPAT3Q9NRZ7 376 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 APEX2Q9UBZ4 518 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 IRX4P78413 519 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 STAT4Q14765 748 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 PDK3Q15120 406 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 GSTA3Q16772 222 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 NADK2Q4G0N4 442 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 MOXD1Q6UVY6 613 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 NOP9Q86U38 636 aaKnown RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 METTL25Q8N6Q8 603 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 BSNDQ8WZ55 320 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 PPP2R3CQ969Q6 453 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 KCNK13Q9HB14 408 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 NEU2Q9Y3R4 380 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 HSPA6P17066 643 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 MUTP22033 750 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 AP2B1P63010 937 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 PDE1BQ01064 536 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 TCHHL1Q5QJ38 904 aaPredicted RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 ANO5Q75V66 913 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 CBWD2Q8IUF1 395 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 LPAR1Q92633 364 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 SYT11Q9BT88 431 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 SAR1AQ9NR31 198 aa16.94■□□□□ 0.3
CCDC8-201ENST00000307522 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
CCDC8-201ENST00000307522 TRIM43BA6NCK2 446 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 MAGEB2O15479 319 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 USP2O75604 605 aaPredicted RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 VCLP18206 1134 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 TFDP1Q14186 410 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 CCDC60Q8IWA6 550 aaPredicted RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 PPM1KQ8N3J5 372 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 CCDC110Q8TBZ0 833 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 ZMPSTE24O75844 475 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 GJB1P08034 283 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 PRPF39Q86UA1 669 aaKnown RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 GDPD5Q8WTR4 605 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 DHX38Q92620 1227 aaKnown RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 OXNAD1Q96HP4 312 aaPredicted RBP16.93■□□□□ 0.3
CCDC8-201ENST00000307522 CNBD2Q96M20 576 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 OSBPL8Q9BZF1 889 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 LRRC19Q9H756 370 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 EURLQ9NYK6 297 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 BTBD7Q9P203 1132 aa16.93■□□□□ 0.3
CCDC8-201ENST00000307522 C15orf38-AP3S2A0A0A6YYH1 394 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 MSX2P35548 267 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms