RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TYK2P29597 1187 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 POU5F1BQ06416 359 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SLC45A4Q5BKX6 768 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 AAGABQ6PD74 315 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 PM20D2Q8IYS1 436 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 MPP5Q8N3R9 675 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 FAM133AQ8N9E0 248 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 PIK3C3Q8NEB9 887 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 SPIRE2Q8WWL2 714 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 PANX3Q96QZ0 392 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 MRPL9Q9BYD2 267 aaKnown RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 ETNK1Q9HBU6 452 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 BCL9LQ86UU0 1499 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 CYBBP04839 570 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 UMPSP11172 480 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 FAM45BPQ6NSW5 357 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 METTL2BQ6P1Q9 378 aaKnown RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 BEND7Q8N7W2 519 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 FAF2Q96CS3 445 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 RBAKQ9NYW8 714 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 TMEM216Q9P0N5 145 aa4.17□□□□□ -1.74
USH2A-201ENST00000307340 KLHL8Q9P2G9 620 aaPredicted RBP4.17□□□□□ -1.74
USH2A-201ENST00000307340 TJAP1Q5JTD0 557 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 C4orf19Q8IY42 314 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GOLM1Q8NBJ4 401 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 IGDCC4Q8TDY8 1250 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZDHHC15Q96MV8 337 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZNF341Q9BYN7 854 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SHCBP1LQ9BZQ2 653 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CDYLQ9Y232 598 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PRMT5O14744 637 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 FSBPO95073 299 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RAD23BP54727 409 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 YWHAGP61981 247 aaKnown RBP eCLIP4.16□□□□□ -1.74
USH2A-201ENST00000307340 BNIP2Q12982 314 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZSWIM7Q19AV6 140 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TSHZ3Q63HK5 1081 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 BTN2A1Q7KYR7 527 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 FBXO33Q7Z6M2 555 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 MAPKAPK5Q8IW41 473 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 LINC00471Q8N535 108 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DDHD1Q8NEL9 900 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GRPEL2Q8TAA5 225 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CABLES1Q8TDN4 633 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PTCD3Q96EY7 689 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 CCT8L2Q96SF2 557 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TMEM245Q9H330 911 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GPAMQ9HCL2 828 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SERTAD1Q9UHV2 236 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PRPF19Q9UMS4 504 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 CDK5RAP2Q96SN8 1893 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZNF263O14978 683 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RTN3O95197 1032 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 ALBP02768 609 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RARBP10826 455 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SNRNP35Q16560 246 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 BHLHE22Q8NFJ8 381 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 FAR1Q8WVX9 515 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TBC1D13Q9NVG8 400 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PRMT3O60678 531 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 STAT5AP42229 794 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GPC3P51654 580 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 STAT5BP51692 787 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ST3GAL1Q11201 340 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DGKDQ16760 1214 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ATL1Q8WXF7 558 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SAMSN1Q9NSI8 373 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 NEU2Q9Y3R4 380 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CCT8L1PA6NM43 557 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 HNMTP50135 292 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DLG1Q12959 904 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 STXBP5Q5T5C0 1151 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 WDR49Q8IV35 697 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PARK7Q99497 189 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 SH3BP4Q9P0V3 963 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 IRS2Q9Y4H2 1338 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CCNA2P20248 432 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PPP2R1BP30154 601 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CDK8P49336 464 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GMFBP60983 142 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PLA2G4FQ68DD2 849 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CPNE2Q96FN4 548 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 RBM15Q96T37 977 aaKnown RBP eCLIP4.16□□□□□ -1.74
USH2A-201ENST00000307340 VPS45Q9NRW7 570 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 LAMB2P55268 1798 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 KPNA4O00629 521 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 NVLO15381 856 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 SIN3BO75182 1162 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 HAUS5O94927 633 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SPIDRQ14159 915 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TMEM86AQ8N2M4 240 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZDHHC4Q9NPG8 344 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 POLIQ9UNA4 740 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 COL1A2P08123 1366 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RNF103-CHMP3A0A140T963 221 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CHADO15335 359 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DLATP10515 647 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 SERPINB1P30740 379 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PABPC1LQ4VXU2 614 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 RABGAP1LQ5R372 815 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms