RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 VAV1P15498 845 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 MSH3P20585 1137 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 RGS7P49802 495 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 MZT2BQ6NZ67 158 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 RNF44Q7L0R7 432 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ZNF589Q86UQ0 364 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 C9orf72Q96LT7 481 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PPP1R2P1Q96PQ5 205 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ANAPC2Q9UJX6 822 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PPP2R1BP30154 601 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 KRT35Q92764 455 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SEPT5Q99719 369 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 NEUROD4Q9HD90 331 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 CCDC162PA2VCL2 907 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PSMD11O00231 422 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 TGM2P21980 687 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 MAPK1P28482 360 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 CCNG1P51959 295 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PLCL1Q15111 1095 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 OCLNQ16625 522 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 MIEF1Q9NQG6 463 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 HAO1Q9UJM8 370 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ALDH9A1P49189 494 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 HSF2Q03933 536 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 LRRC74BQ6ZQY2 392 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SUGP1Q8IWZ8 645 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PTGES3LE9PB15 166 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 IFNA14P01570 189 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 TTC39CQ8N584 583 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 COMMD8Q9NX08 183 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 PRKAG3Q9UGI9 489 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 LCA5LO95447 670 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 GRK3P35626 688 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 HK2P52789 917 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 OVGP1Q12889 678 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 DGUOKQ16854 277 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 CHPFQ8IZ52 775 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ARID1BQ8NFD5 2236 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 POTECB2RU33 542 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 ZNF879B4DU55 563 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 STAU1O95793 577 aaKnown RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 FCGR1AP12314 374 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 LMBRD2Q68DH5 695 aaPredicted RBP13.85□□□□□ -0.19
TRIM56-201ENST00000306085 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 CLCC1Q96S66 551 aa13.85□□□□□ -0.19
TRIM56-201ENST00000306085 E7ENQ6 273 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 HOXB7P09629 217 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 STAT3P40763 770 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 RORBQ92753 470 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 NDUFA13Q9P0J0 144 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 CHP2O43745 196 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 OTUD3Q5T2D3 398 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 LRIG3Q6UXM1 1119 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 RAD54LQ92698 747 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 UBE2QL1A1L167 161 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 MIIPQ5JXC2 388 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 IZUMO2Q6UXV1 221 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 SEPHS2Q99611 448 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 GRID1Q9ULK0 1009 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 LYVE1Q9Y5Y7 322 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 LSM1O15116 133 aaKnown RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 CYP26A1O43174 497 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 RPTNQ6XPR3 784 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 DSG4Q86SJ6 1040 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 A0A0X1KG70 313 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 PLOD3O60568 738 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 UMPSP11172 480 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 SLC1A1P43005 524 aa13.84□□□□□ -0.19
TRIM56-201ENST00000306085 ADARP55265 1226 aaKnown RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 ARID3BQ8IVW6 561 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 RSPH9Q9H1X1 276 aaPredicted RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
TRIM56-201ENST00000306085 MAGEA2P43356 314 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms