RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
PRKCB-201ENST00000303531 YAF2Q8IY57 180 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 GTF3C2Q8WUA4 911 aaPredicted RBP14.45□□□□□ -0.1
PRKCB-201ENST00000303531 VPS50Q96JG6 964 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 INTS5Q6P9B9 1019 aaKnown RBP14.45□□□□□ -0.1
PRKCB-201ENST00000303531 DNAAF5Q86Y56 855 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 GPATCH2LQ9NWQ4 482 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 GARTP22102 1010 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 SERPINB5P36952 375 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 CAP2P40123 477 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 MTFR1Q15390 333 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 ZFYVE19Q96K21 471 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 ANKZF1Q9H8Y5 726 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 CLCA2Q9UQC9 943 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 H3BQF6 201 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 WDR47O94967 919 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 GLI1P08151 1106 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 RALBP11234 206 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 VDRP11473 427 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 SERPINB3P29508 390 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 S100A5P33763 92 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 DSG1Q02413 1049 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 PDK2Q15119 407 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 C11orf63Q6NUN7 778 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 CNBD2Q96M20 576 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 PAFAH2Q99487 392 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 CGRRF1Q99675 332 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 JCADQ9P266 1359 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 UBE3AQ05086 875 aa14.45□□□□□ -0.1
PRKCB-201ENST00000303531 ABI2Q9NYB9 513 aaPredicted RBP14.45□□□□□ -0.1
PRKCB-201ENST00000303531 WLSQ5T9L3 541 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 DENND1BQ6P3S1 775 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 MPZL3Q6UWV2 235 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 NUDT18Q6ZVK8 323 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ZKSCAN4Q969J2 545 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SH3BP1Q9Y3L3 701 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 HNRNPRO43390 633 aaKnown RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 RAP1GAPP47736 663 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 MRPS15P82914 257 aaKnown RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 AGAP9Q5VTM2 703 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.11e-7■□□□□ 10.7
PRKCB-201ENST00000303531 HS6ST3Q8IZP7 471 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 FAM172AQ8WUF8 416 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 TBC1D23Q9NUY8 699 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 POLLQ9UGP5 575 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SOAT2O75908 522 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 AARS2Q5JTZ9 985 aaKnown RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 OLFML2BQ68BL8 750 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CINPQ9BW66 212 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ATP6V1B1P15313 513 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ACO1P21399 889 aaKnown RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SERPINB8P50452 374 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CLCN3P51790 818 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 STX5Q13190 355 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 BRD8Q9H0E9 1235 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 AP1G2O75843 785 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SUPT7LO94864 414 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SUPT20HL2P0C7V6 817 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 GEMP55040 296 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 KIAA2013Q8IYS2 634 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 BLOC1S5Q8TDH9 187 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 RTFDC1Q9BY42 306 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ATP11BQ9Y2G3 1177 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 PROSCO94903 275 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CYP24A1Q07973 514 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 L3MBTL3Q96JM7 780 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ODC1P11926 461 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ACADSP16219 412 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 BLVRAP53004 296 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CCL15Q16663 113 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 ACBD5Q5T8D3 534 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 PRMT6Q96LA8 375 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 RBBP8Q99708 897 aa14.44□□□□□ -0.1
PRKCB-201ENST00000303531 RUVBL2Q9Y230 463 aaKnown RBP14.44□□□□□ -0.1
PRKCB-201ENST00000303531 CFAP99D6REC4 459 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 TPST1O60507 370 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CLEC16AQ2KHT3 1053 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 TNIP2Q8NFZ5 429 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 EXD1Q8NHP7 514 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 TMC2Q8TDI7 906 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 ABHD8Q96I13 439 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CAAP1Q9H8G2 361 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 DTNAQ9Y4J8 743 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 KBTBD13C9JR72 458 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CSE1LP55060 971 aaKnown RBP14.43□□□□□ -0.1
PRKCB-201ENST00000303531 DEPDC1Q5TB30 811 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CCNJLQ8IV13 435 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 KIAA0895Q8NCT3 520 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 AGBL3Q8NEM8 1001 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 DTNBP1Q96EV8 351 aa14.43□□□□□ -0.1
PRKCB-201ENST00000303531 ECSITQ9BQ95 431 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms