RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 APPL2Q8NEU8 664 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 SLC35B2Q8TB61 432 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 RXFP2Q8WXD0 754 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 CAPS2Q9BXY5 557 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 SENP6Q9GZR1 1112 aaPredicted RBP20.39■□□□□ 0.85
HOXC4-201ENST00000303406 SNX25Q9H3E2 840 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 KLK14Q9P0G3 267 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 ABT1Q9ULW3 272 aaKnown RBP20.39■□□□□ 0.85
HOXC4-201ENST00000303406 USP18Q9UMW8 372 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 GABRQQ9UN88 632 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 SPTLC1O15269 473 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 RIPK2O43353 540 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 ACADSBP45954 432 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 ITGA8P53708 1063 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 GDF6Q6KF10 455 aaPredicted RBP20.38■□□□□ 0.85
HOXC4-201ENST00000303406 PMF1Q6P1K2 205 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 REM2Q8IYK8 340 aaPredicted RBP20.38■□□□□ 0.85
HOXC4-201ENST00000303406 ARRDC4Q8NCT1 418 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 KLHDC9Q8NEP7 349 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 OR2W6PQ8NHA6 318 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 PGM2Q96G03 612 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 TNIP3Q96KP6 325 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 HSFY1Q96LI6 401 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 ZWILCHQ9H900 591 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 RSAD1Q9HA92 442 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 AAASQ9NRG9 546 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 ANAPC5Q9UJX4 755 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 DNPEPQ9ULA0 475 aa20.38■□□□□ 0.85
HOXC4-201ENST00000303406 SRRM3A6NNA2 597 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 PTGESO14684 152 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 HUS1O60921 280 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 PDGFRAP16234 1089 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 SOX4Q06945 474 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 KRT71Q3SY84 523 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 KCTD16Q68DU8 428 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 CXCL17Q6UXB2 119 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 SH2D3CQ8N5H7 860 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 TEKT4Q8WW24 435 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 TBCBQ99426 244 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ROPN1BQ9BZX4 212 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 SEMA4AQ9H3S1 761 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ROPN1Q9HAT0 212 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 PCDH9Q9HC56 1237 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 TMEM88BA6NKF7 163 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ZNF487B1APH4 448 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 DNALI1O14645 258 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 GPR182O15218 404 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 FGFR1P11362 822 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 LILRA4P59901 499 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 PDE4CQ08493 712 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 KCTD19Q17RG1 926 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 BOLA3Q53S33 107 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 IZUMO3Q5VZ72 239 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 HIBCHQ6NVY1 386 aaPredicted RBP20.37■□□□□ 0.85
HOXC4-201ENST00000303406 GSTA5Q7RTV2 222 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ADGRF2Q8IZF7 708 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 TLCD1Q96CP7 247 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ARHGAP39Q9C0H5 1083 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 FAM49BQ9NUQ9 324 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 FAM105AQ9NUU6 356 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ST3GAL5Q9UNP4 418 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 ZNF148Q9UQR1 794 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 GIT1Q9Y2X7 761 aa20.37■□□□□ 0.85
HOXC4-201ENST00000303406 IVLP07476 585 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 PTPN9P43378 593 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 ARSEP51690 589 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 SLC29A2Q14542 456 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 PDK2Q15119 407 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 C6orf118Q5T5N4 469 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 TRNP1Q6NT89 227 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 SLC26A9Q7LBE3 791 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 MRPL10Q7Z7H8 261 aaKnown RBP20.36■□□□□ 0.85
HOXC4-201ENST00000303406 KCTD6Q8NC69 237 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 ZIC5Q96T25 663 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 DPEP3Q9H4B8 488 aa20.36■□□□□ 0.85
HOXC4-201ENST00000303406 APOC4-APOC2K7ER74 178 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 PAPSS1O43252 624 aaPredicted RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 PGK1P00558 417 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 APOC2P02655 101 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 SDC4P31431 198 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 RGS7P49802 495 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 IRAK1P51617 712 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 PRKCZQ05513 592 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 CACNB2Q08289 660 aaPredicted RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 CCDC14Q49A88 953 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 CCSAPQ6IQ19 270 aaPredicted RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 CYP4V2Q6ZWL3 525 aaPredicted RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 KHSRPQ92945 711 aaKnown RBP eCLIP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 ACSF2Q96CM8 615 aaPredicted RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 HNRNPABQ99729 332 aaKnown RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 PHACTR1Q9C0D0 580 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 CDC42EP4Q9H3Q1 356 aaKnown RBP20.35■□□□□ 0.85
HOXC4-201ENST00000303406 XPNPEP3Q9NQH7 507 aa20.35■□□□□ 0.85
HOXC4-201ENST00000303406 TULP2O00295 520 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 EIF3HO15372 352 aaKnown RBP eCLIP20.34■□□□□ 0.85
HOXC4-201ENST00000303406 PRPSAP2O60256 369 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 CST8O60676 142 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 CHRNA1P02708 482 aa20.34■□□□□ 0.85
HOXC4-201ENST00000303406 RAB27AP51159 221 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms