RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 RBBP8NLQ8NC74 664 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PDCD10Q9BUL8 212 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MCM8Q9UJA3 840 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PSMD12O00232 456 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 IGF2BP3O00425 579 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ERN1O75460 977 aaKnown RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MFN2O95140 757 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 LRG1P02750 347 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PCNAP12004 261 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 RXRBP28702 533 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PCSK1P29120 753 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 DSG3P32926 999 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 AVPR1AP37288 418 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 DMPKQ09013 629 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MRNIPQ6NTE8 343 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ARID3BQ8IVW6 561 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 BLOC1S5Q8TDH9 187 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 USP13Q92995 863 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MS4A14Q96JA4 679 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 KATNAL1Q9BW62 490 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF304Q9HCX3 659 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 FAM49BQ9NUQ9 324 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 SLC38A7Q9NVC3 462 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ANXA9O76027 345 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PARNO95453 639 aaKnown RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ECDO95905 644 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 SERPINB5P36952 375 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 OR1G1P47890 313 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ACOT2P49753 483 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 NCOA4Q13772 614 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 KCNB1Q14721 858 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 EPHA7Q15375 998 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 SV2CQ496J9 727 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 IER5Q5VY09 327 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MTSS1LQ765P7 747 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 TRPC4APQ8TEL6 797 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MAGED4Q96JG8 741 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 STK33Q9BYT3 514 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 FAM153AQ9UHL3 310 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 LNPEPQ9UIQ6 1025 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 SIK3Q9Y2K2 1263 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ERBB3P21860 1342 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 EIF3HO15372 352 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ASNA1O43681 348 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PSMB9P28065 219 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 CDC73Q6P1J9 531 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 GLB1LQ6UWU2 654 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 STX12Q86Y82 276 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ENKURQ8TC29 256 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 UTP15Q8TED0 518 aaKnown RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 UCMAQ8WVF2 138 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 BHMTQ93088 406 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 RMND5BQ96G75 393 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 FAR2Q96K12 515 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 E7ENQ6 273 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 TEX33O43247 280 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 PPP2R1BP30154 601 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 NME5P56597 212 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MTM1Q13496 603 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 KPNB1Q14974 876 aaKnown RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 AGBL2Q5U5Z8 902 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 MYO1HQ8N1T3 1032 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-201ENST00000302528 FAM118BQ9BPY3 351 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 TRIM39Q9HCM9 518 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 NDUFA13Q9P0J0 144 aa10.75□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 A0A1W2PQC6 194 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PMPCBO75439 489 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ENO2P09104 434 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 NMT1P30419 496 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 IL5RAQ01344 420 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF177Q13360 481 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 C4orf22Q6V702 233 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ZNF624Q9P2J8 865 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 APEX2Q9UBZ4 518 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SNX12Q9UMY4 172 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 DUSP12Q9UNI6 340 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PSTPIP1O43586 416 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 RNASEH1O60930 286 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 FAM20BO75063 409 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 RPS6KA5O75582 802 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 THRAP10827 490 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 NCAM1P13591 858 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 GPD1P21695 349 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 PAICSP22234 425 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 OASLQ15646 514 aaKnown RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 QRICH1Q2TAL8 776 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 RIBC1Q8N443 379 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLIP1-201ENST00000302528 UBASH3BQ8TF42 649 aa10.74□□□□□ -0.69
CLIP1-201ENST00000302528 MCRS1Q96EZ8 462 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms