RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C2CD6Q53TS8 623 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 TCEAL5Q5H9L2 206 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 VSTM1Q6UX27 236 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 C4orf50Q6ZRC1 276 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 Q7L0L9 218 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 TMTC1Q8IUR5 882 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 SPATA2LQ8IUW3 424 aaPredicted RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 PLCD3Q8N3E9 789 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 C1orf131Q8NDD1 294 aaKnown RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 STK32AQ8WU08 396 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 CPA5Q8WXQ8 436 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.83e-11■■■■■ 27.7
RFX3-201ENST00000302303 SMARCD1Q96GM5 515 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 C8orf48Q96LL4 319 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 FAM161BQ96MY7 647 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 CPXM1Q96SM3 734 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 EMILIN2Q9BXX0 1053 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 UBXN6Q9BZV1 441 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 SPTLC3Q9NUV7 552 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
RFX3-201ENST00000302303 EPN1Q9Y6I3 576 aaPredicted RBP10.03□□□□□ -0.8
RFX3-201ENST00000302303 A0A0U1RQJ8 604 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 RCCD1A6NED2 376 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 LINC01565O15544 149 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 LSM8O95777 96 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 FAM200BP0CF97 657 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 GZMAP12544 262 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 TNFAIP3P21580 790 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MMP8P22894 467 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 GABRB2P47870 512 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 NRIP1P48552 1158 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 KIF11P52732 1056 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 BCAT1P54687 386 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 USP46P62068 366 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 BST2Q10589 180 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 PDCLQ13371 301 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MTMR3Q13615 1198 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 CTC1Q2NKJ3 1217 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 TDRD12Q587J7 1177 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 NAA35Q5VZE5 725 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 ACAD10Q6JQN1 1059 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 LLGL2Q6P1M3 1020 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 CYP26C1Q6V0L0 522 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 TMEM184AQ6ZMB5 413 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MON1BQ7L1V2 547 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 PHF13Q86YI8 300 aaPredicted RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 KREMEN2Q8NCW0 462 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 SCAMP5Q8TAC9 235 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 GPR152Q8TDT2 470 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 ATRIPQ8WXE1 791 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 KCTD13Q8WZ19 329 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 ANP32BQ92688 251 aaKnown RBP10.02□□□□□ -0.8
RFX3-201ENST00000302303 GUCD1Q96NT3 240 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MED10Q9BTT4 135 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 LRRC3Q9BY71 257 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 TLE6Q9H808 572 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 CYP4F11Q9HBI6 524 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MAFFQ9ULX9 164 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 USP3Q9Y6I4 520 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 MYO9BQ13459 2157 aa10.02□□□□□ -0.8
RFX3-201ENST00000302303 PRRC2BQ5JSZ5 2229 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 FAM92AA1XBS5 289 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 RFPL2O75678 378 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 NDUFA10O95299 355 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 GLUD1P00367 558 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 ABL1P00519 1130 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 ERBB2P04626 1255 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 SETSIPP0DME0 302 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 ANXA13P27216 316 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 RGS7P49802 495 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 ADAM15Q13444 863 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 ALKBH5Q6P6C2 394 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 CCDC170Q8IYT3 715 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 NDRG1Q92597 394 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 ZNF707Q96C28 371 aaPredicted RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 PIWIL1Q96J94 861 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 SPATA17Q96L03 361 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 CCDC42Q96M95 316 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 PACSIN1Q9BY11 444 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 NSUN3Q9H649 340 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 PNPLA8Q9NP80 782 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 DMAP1Q9NPF5 467 aaPredicted RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
RFX3-201ENST00000302303 HESX1Q9UBX0 185 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 TFR2Q9UP52 801 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 YIPF1Q9Y548 306 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 INSL5Q9Y5Q6 135 aa10.02□□□□□ -0.81
RFX3-201ENST00000302303 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
RFX3-201ENST00000302303 MTCL1Q9Y4B5 1905 aaKnown RBP10.01□□□□□ -0.81
RFX3-201ENST00000302303 PATJQ8NI35 1801 aa10.01□□□□□ -0.81
RFX3-201ENST00000302303 C5orf42Q9H799 3197 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms