RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 WHRNQ9P202 907 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 TRIM66O15016 1216 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 IVLP07476 585 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 FGFR1P11362 822 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 MAN1A1P33908 653 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 ZC3H12AQ5D1E8 599 aaKnown RBP15.3■□□□□ 0.04
SMG8-201ENST00000300917 ANKMY2Q8IV38 441 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 CYP3A43Q9HB55 503 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 FEZ2Q9UHY8 353 aaPredicted RBP15.3■□□□□ 0.04
SMG8-201ENST00000300917 ANK1P16157 1881 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 KDELR1P24390 212 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 PAN2Q504Q3 1202 aaKnown RBP15.3■□□□□ 0.04
SMG8-201ENST00000300917 RBM15Q96T37 977 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMG8-201ENST00000300917 OSBPL7Q9BZF2 842 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 HESX1Q9UBX0 185 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 HEY1Q9Y5J3 304 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 C17orf102A2RUQ5 167 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 CLDN5O00501 218 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 PTGISQ16647 500 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 FAM71DQ8N9W8 422 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 NINJ2Q9NZG7 142 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 F5H423 210 aaPredicted RBP15.29■□□□□ 0.04
SMG8-201ENST00000300917 HMGCRP04035 888 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 PPP1R2P3Q6NXS1 205 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 C10orf67Q8IYJ2 551 aa15.29■□□□□ 0.04
SMG8-201ENST00000300917 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
SMG8-201ENST00000300917 SMIM35A0A1B0GVV1 85 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 GPD1P21695 349 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 TAP1Q03518 808 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 RHBDF2Q6PJF5 856 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 KCNK9Q9NPC2 374 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 IPPQ9Y573 584 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 CITO14578 2027 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 NUDT17P0C025 328 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 CHN1P15882 459 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 CPT1AP50416 773 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 FBXO47Q5MNV8 452 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 UNC45BQ8IWX7 931 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 SLC2A14Q8TDB8 520 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 WNT8BQ93098 351 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 SLC12A6Q9UHW9 1150 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 SCN4AP35499 1836 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 C3orf70A6NLC5 250 aaPredicted RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 POC1B-GALNT4F8VUJ3 575 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 PRPSAP2O60256 369 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 GABBR2O75899 941 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 KRT7P08729 469 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 KLRC2P26717 231 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 GNL1P36915 607 aaPredicted RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 VCPP55072 806 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 AUHQ13825 339 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 CA9Q16790 459 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 LCLAT1Q6UWP7 414 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 ARFGAP2Q8N6H7 521 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 FAM172AQ8WUF8 416 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 RSAD2Q8WXG1 361 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 FAM149B1Q96BN6 582 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 CCT8L2Q96SF2 557 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 MAK16Q9BXY0 300 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 ADAM7Q9H2U9 754 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 DDX56Q9NY93 547 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
SMG8-201ENST00000300917 NEU2Q9Y3R4 380 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
SMG8-201ENST00000300917 KPNA7A9QM74 516 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 GBP1P32455 592 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 RGS2P41220 211 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 INCA1Q0VD86 236 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 KRT81Q14533 505 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 FAXCQ5TGI0 409 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
SMG8-201ENST00000300917 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 NLRP14Q86W24 1093 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 CCDC13Q8IYE1 715 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 ZBED8Q8IZ13 594 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 SNX25Q9H3E2 840 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 VPS37BQ9H9H4 285 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.04
SMG8-201ENST00000300917 EBAG9O00559 213 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 TTC4O95801 387 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 TRUB2O95900 331 aaKnown RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.03
SMG8-201ENST00000300917 ANKRD22Q5VYY1 191 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 RGMBQ6NW40 437 aa15.27■□□□□ 0.03
SMG8-201ENST00000300917 CYP4X1Q8N118 509 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms