RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TTYH3Q9C0H2 523 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 SLITRK6Q9H5Y7 841 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 C8orf33Q9H7E9 229 aaPredicted RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 MMRN2Q9H8L6 949 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 ASAH2Q9NR71 780 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 TOPORSQ9NS56 1045 aaPredicted RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 SLC38A7Q9NVC3 462 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 RBAKQ9NYW8 714 aaPredicted RBP22.45■■□□□ 1.18
SMCO4-201ENST00000298966 CEP72Q9P209 647 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 SPAG17Q6Q759 2223 aa22.45■■□□□ 1.18
SMCO4-201ENST00000298966 HEPACAM2A8MVW5 462 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 K7ESF4 209 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 PODXLO00592 558 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 CITO14578 2027 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 MOSPD3O75425 235 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 SKILP12757 684 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 ANK1P16157 1881 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 MXI1P50539 228 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 KPNA1P52294 538 aaPredicted RBP22.44■■□□□ 1.18
SMCO4-201ENST00000298966 ZBED6P86452 979 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 KCNMA1Q12791 1236 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 CTXN3Q4LDR2 81 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 DGKKQ5KSL6 1271 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 SMYD5Q6GMV2 418 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 FAM160A2Q8N612 972 aaPredicted RBP22.44■■□□□ 1.18
SMCO4-201ENST00000298966 ZBTB45Q96K62 511 aaPredicted RBP22.44■■□□□ 1.18
SMCO4-201ENST00000298966 CCDC94Q9BW85 323 aaPredicted RBP22.44■■□□□ 1.18
SMCO4-201ENST00000298966 GPR88Q9GZN0 384 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 TMEM8AQ9HCN3 771 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 PYCARDQ9ULZ3 195 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 MYO6Q9UM54 1294 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 NUB1Q9Y5A7 615 aa22.44■■□□□ 1.18
SMCO4-201ENST00000298966 ZFHX4Q86UP3 3567 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 IL18RAPO95256 599 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 GJA1P17302 382 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 FECHP22830 423 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 PMLP29590 882 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 CASP14P31944 242 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 LIMK1P53667 647 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 SOX4Q06945 474 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 TWF1Q12792 350 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 N4BP2L1Q5TBK1 243 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 KRT39Q6A163 491 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 CRELD2Q6UXH1 353 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 C12orf50Q8NA57 414 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 OR8K1Q8NGG5 319 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 FAM81BQ96LP2 452 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 HAPLN2Q9GZV7 340 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 CDT1Q9H211 546 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 RBM12Q9NTZ6 932 aaKnown RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 AFF4Q9UHB7 1163 aaKnown RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 CPSF3Q9UKF6 684 aaKnown RBP22.43■■□□□ 1.18
SMCO4-201ENST00000298966 MAFFQ9ULX9 164 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 COQ4Q9Y3A0 265 aa22.43■■□□□ 1.18
SMCO4-201ENST00000298966 TTC26A0AVF1 554 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 SLC38A8A6NNN8 435 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 ARNTLO00327 626 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 CHADO15335 359 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 FAM189A1O60320 539 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 CLTAP09496 248 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 KRT9P35527 623 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 GRM5P41594 1212 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 EPHA5P54756 1037 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 MRPL58Q14197 206 aaKnown RBP22.42■■□□□ 1.18
SMCO4-201ENST00000298966 TEAD2Q15562 447 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 ZNF280DQ6N043 979 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 CD302Q8IX05 232 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 GCNT4Q9P109 453 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 BAHCC1Q9P281 2608 aa22.42■■□□□ 1.18
SMCO4-201ENST00000298966 ATRXP46100 2492 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 NCANO14594 1321 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 LRRIQ3A6PVS8 624 aaPredicted RBP22.41■■□□□ 1.18
SMCO4-201ENST00000298966 TRIM49P0CI25 452 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 TRIM49CP0CI26 452 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 PON1P27169 355 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 ACOT2P49753 483 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 ADKP55263 362 aaKnown RBP22.41■■□□□ 1.18
SMCO4-201ENST00000298966 XKR4Q5GH76 650 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 Q6ZS52 159 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 CACNA2D4Q7Z3S7 1137 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 WDR5BQ86VZ2 330 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 NT5DC4Q86YG4 428 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 WDR49Q8IV35 697 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 CEP120Q8N960 986 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 SYN2Q92777 582 aaPredicted RBP22.41■■□□□ 1.18
SMCO4-201ENST00000298966 DNAJC7Q99615 494 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 CGRRF1Q99675 332 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 LSM14BQ9BX40 385 aaKnown RBP22.41■■□□□ 1.18
SMCO4-201ENST00000298966 ABHD10Q9NUJ1 306 aa22.41■■□□□ 1.18
SMCO4-201ENST00000298966 ZNHIT6Q9NWK9 470 aaKnown RBP22.41■■□□□ 1.18
SMCO4-201ENST00000298966 CPB1P15086 417 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 HOXA6P31267 233 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 RPL9P32969 192 aaKnown RBP22.4■■□□□ 1.18
SMCO4-201ENST00000298966 SOX9P48436 509 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 SHC2P98077 582 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 PPP3CAQ08209 521 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 C1orf220Q5T0J3 134 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 TRIM65Q6PJ69 517 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 TMEM139Q8IV31 216 aa22.4■■□□□ 1.18
SMCO4-201ENST00000298966 ZSWIM2Q8NEG5 633 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms