RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 IFNAR2P48551 515 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 NOVA1P51513 510 aaKnown RBP11.32□□□□□ -0.6
RFC4-201ENST00000296273 AMPD3Q01432 767 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 NCAPHQ15003 741 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 USP39Q53GS9 565 aaKnown RBP11.32□□□□□ -0.6
RFC4-201ENST00000296273 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 MYRFLQ96LU7 910 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 ACBD6Q9BR61 282 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 FBRSL1Q9HCM7 1045 aaKnown RBP11.32□□□□□ -0.6
RFC4-201ENST00000296273 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 DUS2Q9NX74 493 aaKnown RBP11.32□□□□□ -0.6
RFC4-201ENST00000296273 MAN1B1Q9UKM7 699 aa11.32□□□□□ -0.6
RFC4-201ENST00000296273 TRAV19A0A0A6YYK7 116 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 NOL4O94818 638 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TUBB4AP04350 444 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 CEACAM1P13688 526 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TCF3P15923 654 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 GBP1P32455 592 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 PDE6CP51160 858 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 DGKEP52429 567 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 MYL7Q01449 175 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 DPYDQ12882 1025 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 USP4Q13107 963 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 PSMD2Q13200 908 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 ZNF77Q15935 545 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 E2F4Q16254 413 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TCEAL6Q6IPX3 200 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 UNQ6494/PRO21346Q6UXR6 183 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TMEM86AQ8N2M4 240 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 CCDC150Q8NCX0 1101 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TSTD1Q8NFU3 115 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 TCEAL3Q969E4 200 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 DHX58Q96C10 678 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 ZHX3Q9H4I2 956 aa11.31□□□□□ -0.6
RFC4-201ENST00000296273 LNP1A1A4G5 178 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 BIN1O00499 593 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 KHNYNO15037 678 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 HUS1O60921 280 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 TADA3O75528 432 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 NFATC1O95644 943 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CKMP06732 381 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 PFKLP17858 780 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CSRP1P21291 193 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 STAT6P42226 847 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CDR1P51861 262 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 GRIN1Q05586 938 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 ZNF252P-AS1Q0IIN9 211 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 KCNB1Q14721 858 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 EML3Q32P44 896 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 RRAGBQ5VZM2 374 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CCDC186Q7Z3E2 898 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 KIAA1524Q8TCG1 905 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 RAD54LQ92698 747 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
RFC4-201ENST00000296273 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 BLOC1S4Q9NUP1 217 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 TMLHEQ9NVH6 421 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
RFC4-201ENST00000296273 DENND4CQ5VZ89 1909 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 EML5Q05BV3 1969 aa11.3□□□□□ -0.6
RFC4-201ENST00000296273 DCLK1O15075 740 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 CCP110O43303 1012 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
RFC4-201ENST00000296273 SERPINC1P01008 464 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 LHX1P48742 406 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 GPR15P49685 360 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 FANCCQ00597 558 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 STIM1Q13586 685 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 MCM6Q14566 821 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 DDR2Q16832 855 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 INTS6LQ5JSJ4 861 aaKnown RBP11.29□□□□□ -0.6
RFC4-201ENST00000296273 CRELD2Q6UXH1 353 aaPredicted RBP11.29□□□□□ -0.6
RFC4-201ENST00000296273 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 LRRC52Q8N7C0 313 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 PDILTQ8N807 584 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 SPC24Q8NBT2 197 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
RFC4-201ENST00000296273 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
RFC4-201ENST00000296273 CNOT6LQ96LI5 555 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms