RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ACADSBP45954 432 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 OR1G1P47890 313 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 LLGL1Q15334 1064 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 TAF5Q15542 800 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 TRNP1Q6NT89 227 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 TMCO3Q6UWJ1 677 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ZDHHC14Q8IZN3 488 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 EXD1Q8NHP7 514 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 KHSRPQ92945 711 aaKnown RBP eCLIP24.02■■□□□ 1.44
PTX3-201ENST00000295927 PCED1BQ96HM7 432 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.02■■□□□ 1.44
PTX3-201ENST00000295927 CAPN15O75808 1086 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 BEST1O76090 585 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ZRANB2O95218 330 aaKnown RBP eCLIP24.02■■□□□ 1.44
PTX3-201ENST00000295927 LCP1P13796 627 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 GJA8P48165 433 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ZNF143P52747 638 aaPredicted RBP24.02■■□□□ 1.44
PTX3-201ENST00000295927 SLC8A3P57103 927 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 TXNRD3NBQ6F5E7 133 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 DEFB128Q7Z7B8 93 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 PIGZQ86VD9 579 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 MYCBPAPQ8TBZ2 947 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 RXFP2Q8WXD0 754 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 RUBCNQ92622 972 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 CASD1Q96PB1 797 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ACBD6Q9BR61 282 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 PLEKHA4Q9H4M7 779 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 SLITRK6Q9H5Y7 841 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ZNF446Q9NWS9 450 aa24.02■■□□□ 1.44
PTX3-201ENST00000295927 ARHGEF37A1IGU5 675 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 TMEM189-UBE2V1I3L0A0 370 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 FSCN2O14926 492 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 FLT3P36888 993 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 GATMP50440 423 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 ACAP1Q15027 740 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 CLEC20AQ6ZU45 233 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 CCDC50Q8IVM0 306 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 CRIPAKQ8N1N5 446 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 PRELID2Q8N945 189 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 HNRNPLLQ8WVV9 542 aaKnown RBP24.01■■□□□ 1.43
PTX3-201ENST00000295927 TBX21Q9UL17 535 aa24.01■■□□□ 1.43
PTX3-201ENST00000295927 MICAL3Q7RTP6 2002 aa24■■□□□ 1.43
PTX3-201ENST00000295927 ERLIN1O75477 346 aa24■■□□□ 1.43
PTX3-201ENST00000295927 SEC31AO94979 1220 aaKnown RBP24■■□□□ 1.43
PTX3-201ENST00000295927 HEXIM1O94992 359 aaKnown RBP24■■□□□ 1.43
PTX3-201ENST00000295927 GLI1P08151 1106 aa24■■□□□ 1.43
PTX3-201ENST00000295927 FAM200BP0CF97 657 aa24■■□□□ 1.43
PTX3-201ENST00000295927 PDGFRAP16234 1089 aa24■■□□□ 1.43
PTX3-201ENST00000295927 TYMPP19971 482 aa24■■□□□ 1.43
PTX3-201ENST00000295927 SIX1Q15475 284 aaPredicted RBP24■■□□□ 1.43
PTX3-201ENST00000295927 OVOS1Q6IE37 1185 aa24■■□□□ 1.43
PTX3-201ENST00000295927 FAM35AQ86V20 835 aa24■■□□□ 1.43
PTX3-201ENST00000295927 CLEC4CQ8WTT0 213 aa24■■□□□ 1.43
PTX3-201ENST00000295927 CNPY3Q9BT09 278 aa24■■□□□ 1.43
PTX3-201ENST00000295927 ARFGAP3Q9NP61 516 aa24■■□□□ 1.43
PTX3-201ENST00000295927 KRT82Q9NSB4 513 aa24■■□□□ 1.43
PTX3-201ENST00000295927 KLHL11Q9NVR0 708 aa24■■□□□ 1.43
PTX3-201ENST00000295927 ASNSD1Q9NWL6 643 aa24■■□□□ 1.43
PTX3-201ENST00000295927 MTUS1Q9ULD2 1270 aa24■■□□□ 1.43
PTX3-201ENST00000295927 PCDHB8Q9UN66 801 aa24■■□□□ 1.43
PTX3-201ENST00000295927 PRG3Q9Y2Y8 225 aaPredicted RBP24■■□□□ 1.43
PTX3-201ENST00000295927 SLC25A11Q02978 314 aaKnown RBP24■■□□□ 1.43
PTX3-201ENST00000295927 PKN2Q16513 984 aaKnown RBP24■■□□□ 1.43
PTX3-201ENST00000295927 PPP2R5EQ16537 467 aa24■■□□□ 1.43
PTX3-201ENST00000295927 ANKLE1Q8NAG6 615 aa24■■□□□ 1.43
PTX3-201ENST00000295927 HERPUD2Q9BSE4 406 aa24■■□□□ 1.43
PTX3-201ENST00000295927 AMACRQ9UHK6 382 aa24■■□□□ 1.43
PTX3-201ENST00000295927 RNF8O76064 485 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 KRT1P04264 644 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 RARAP10276 462 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 LBX1P52954 281 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 MAP3K7CLP57077 242 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 INTS6LQ5JSJ4 861 aaKnown RBP23.99■■□□□ 1.43
PTX3-201ENST00000295927 ZFYVE27Q5T4F4 411 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 CCNI2Q6ZMN8 369 aaPredicted RBP23.99■■□□□ 1.43
PTX3-201ENST00000295927 POLNQ7Z5Q5 900 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 RCOR2Q8IZ40 523 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 THEM5Q8N1Q8 247 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 RNF25Q96BH1 459 aaPredicted RBP23.99■■□□□ 1.43
PTX3-201ENST00000295927 NRDE2Q9H7Z3 1164 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
PTX3-201ENST00000295927 DDX56Q9NY93 547 aaKnown RBP23.99■■□□□ 1.43
PTX3-201ENST00000295927 PI4K2BG5E9Z4 385 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 PHF2O75151 1096 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 AP1G2O75843 785 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 RALAP11233 206 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 IL1R2P27930 398 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 SMC1AQ14683 1233 aaKnown RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 HADHQ16836 314 aaKnown RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 FAM171BQ6P995 826 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 SLC26A9Q7LBE3 791 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 OR10T2Q8NGX3 314 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 CCDC26Q8TAB7 109 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 KCTD13Q8WZ19 329 aa23.98■■□□□ 1.43
PTX3-201ENST00000295927 ACSF2Q96CM8 615 aaPredicted RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 PAWRQ96IZ0 340 aaKnown RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 RBM41Q96IZ5 413 aaKnown RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 FNDC1Q4ZHG4 1894 aaPredicted RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 ZSCAN5CA6NGD5 496 aaPredicted RBP23.98■■□□□ 1.43
PTX3-201ENST00000295927 DPYSL4O14531 572 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms