RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PAX3P23760 479 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 GJA4P35212 333 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 LONP1P36776 959 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 CASP5P51878 434 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 TFAMQ00059 246 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 BFSP1Q12934 665 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 NNTQ13423 1086 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 RABEP1Q15276 862 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 SV2CQ496J9 727 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 STPG1Q5TH74 334 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 LARP1BQ659C4 914 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 SLFN12LQ6IEE8 588 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 TCEAL6Q6IPX3 200 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 CACNA2D4Q7Z3S7 1137 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 MON1AQ86VX9 555 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 RPLP0P6Q8NHW5 317 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 CXorf38Q8TB03 319 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 C2orf15Q8WU43 125 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 TCEAL3Q969E4 200 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 PKMYT1Q99640 499 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 DUSP15Q9H1R2 295 aaPredicted RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 LINC00597Q9H2U6 94 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 ST6GALNAC4Q9H4F1 302 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 PCIF1Q9H4Z3 704 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 TRPC7Q9HCX4 862 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 GTF3C4Q9UKN8 822 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 KIF3AQ9Y496 699 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 WNT6Q9Y6F9 365 aa9.98□□□□□ -0.81
CNOT9-202ENST00000295701 ASCC3Q8N3C0 2202 aaKnown RBP9.98□□□□□ -0.81
CNOT9-202ENST00000295701 USP24Q9UPU5 2620 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 WFS1O76024 890 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 CSH1P0DML2 217 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 CSH2P0DML3 217 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 ZXDBP98169 803 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 TSPY1Q01534 308 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 SMARCB1Q12824 385 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 AGERQ15109 404 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 PLK5Q496M5 336 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 IL31Q6EBC2 164 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 FAM173BQ6P4H8 233 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 BRSK2Q8IWQ3 736 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 CSGALNACT2Q8N6G5 542 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 C12orf50Q8NA57 414 aaPredicted RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 NOC3LQ8WTT2 800 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 MRPS31Q92665 395 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 P2RY13Q9BPV8 354 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 MRPL44Q9H9J2 332 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 PDE11AQ9HCR9 933 aa9.97□□□□□ -0.81
CNOT9-202ENST00000295701 DUS2Q9NX74 493 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 DDX43Q9NXZ2 648 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 RALYQ9UKM9 306 aaKnown RBP9.97□□□□□ -0.81
CNOT9-202ENST00000295701 CCDC163A0A0D9SF12 145 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 GIPC1O14908 333 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 NOL4O94818 638 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 IL18RAPO95256 599 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 DRD1P21728 446 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SCP2P22307 547 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 LMO2P25791 158 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 DDX6P26196 483 aaKnown RBP eCLIP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 PMLP29590 882 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 LIMK1P53667 647 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 PSMD2Q13200 908 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 DMC1Q14565 340 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 MTF1Q14872 753 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 POSTNQ15063 836 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 PTPAQ15257 358 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ZNF77Q15935 545 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SOWAHAQ2M3V2 549 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 EML3Q32P44 896 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 L1TD1Q5T7N2 865 aaKnown RBP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ERICH6BQ5W0A0 696 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 BPHLQ86WA6 291 aaPredicted RBP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SFTPA1Q8IWL2 248 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SCN4BQ8IWT1 228 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 GLIS3Q8NEA6 775 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SH3RF2Q8TEC5 729 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 CD101Q93033 1021 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 LOXL4Q96JB6 756 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ZC3H10Q96K80 434 aaKnown RBP9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ACCSQ96QU6 501 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 ACBD6Q9BR61 282 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 GCNT4Q9P109 453 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SIX4Q9UIU6 781 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 SNX9Q9Y5X1 595 aa9.96□□□□□ -0.82
CNOT9-202ENST00000295701 A0A087X0B3 334 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms