RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CPT1BQ92523 772 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 DRG1Q9Y295 367 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 HEY1Q9Y5J3 304 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 CITO14578 2027 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 P4HA1P13674 534 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 DNAJC3Q13217 504 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 GOLGA7BQ2TAP0 167 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 ZNF484Q5JVG2 852 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 FAXCQ5TGI0 409 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRNP1Q6NT89 227 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 DRICH1Q6PGQ1 229 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 DARS2Q6PI48 645 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 POLNQ7Z5Q5 900 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 CCDC134Q9H6E4 229 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 SETD4Q9NVD3 440 aa16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 USP15Q9Y4E8 981 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-201ENST00000294129 MCF2LO15068 1137 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 UBOX5O94941 541 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 NPTXRO95502 500 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 FOXN2P32314 431 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 EPHX2P34913 555 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 DPP9Q86TI2 863 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 C12orf65Q9H3J6 166 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 KLC4Q9NSK0 619 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 LGALS13Q9UHV8 139 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SBF1O95248 1867 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 FAM47DPA6NHR8 397 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 H7C0C1 242 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 TSPAN1O60635 241 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 TMEM63AO94886 807 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CA4P22748 312 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 ATP5OP48047 213 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 WDR4P57081 412 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SNAPC2Q13487 334 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 C3orf62Q6ZUJ4 267 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 BBS12Q6ZW61 710 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 TBC1D1Q86TI0 1168 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SCUBE3Q8IX30 993 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 MAML1Q92585 1016 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 KDM4CQ9H3R0 1056 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CD248Q9HCU0 757 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 SNTG2Q9NY99 539 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 XPO7Q9UIA9 1087 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRUB2O95900 331 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 RPA3P35244 121 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 KRT81Q14533 505 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 ZNF268Q14587 947 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 PPP6R3Q5H9R7 873 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 SPATA21Q7Z572 469 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 TRABD2AQ86V40 505 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 FBXO36Q8NEA4 188 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 SMC6Q96SB8 1091 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 MRPL45Q9BRJ2 306 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 B3GNT5Q9BYG0 378 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 WDR35Q9P2L0 1181 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 BARX2Q9UMQ3 279 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 SHOC2Q9UQ13 582 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 TCEA3O75764 348 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 VDRP11473 427 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 GPD1P21695 349 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 YARSP54577 528 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 GPX6P59796 221 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 ITIH4Q14624 930 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 GRIK4Q16099 956 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 PPP1R26Q5T8A7 1209 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 PALM2Q8IXS6 379 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 PPIL6Q8IXY8 311 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 TTC25Q96NG3 672 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 YY1AP1Q9H869 796 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 SLCO1B3Q9NPD5 702 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 ASNSD1Q9NWL6 643 aa16.54■□□□□ 0.24
NCKIPSD-201ENST00000294129 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 PDHXO00330 501 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 MAGEB2O15479 319 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 PRPSAP2O60256 369 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 SUN1O94901 812 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 RBP5P82980 135 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 PNMA8AQ86V59 439 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 NT5C1AQ9BXI3 368 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.53■□□□□ 0.245e-6■■□□□ 12.1
NCKIPSD-201ENST00000294129 TUBGCP4Q9UGJ1 667 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 CLUHO75153 1309 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 AVILO75366 819 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 ARL4CP56559 192 aa16.53■□□□□ 0.24
NCKIPSD-201ENST00000294129 PMF1Q6P1K2 205 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms