RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SRGAP2CP0DJJ0 459 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ARP10275 920 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 AP3M2P53677 418 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ITIH4Q14624 930 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZNF484Q5JVG2 852 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 SETD3Q86TU7 594 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ACAP3Q96P50 834 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 A0A1W2PQ45 241 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 A0A1W2PQY0 241 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 TEX12Q9BXU0 123 aa12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-201ENST00000293748 BAZ2BQ9UIF8 2168 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 HNRNPCL2B2RXH8 293 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 SUPT3HO75486 399 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 EYA4O95677 639 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 PRLRP16471 622 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 ULK4Q96C45 1275 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 PNKPQ96T60 521 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 C4orf33Q8N1A6 199 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 ANKRD27Q96NW4 1050 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 CARD9Q9H257 536 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 EML4Q9HC35 981 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 KIF17Q9P2E2 1029 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 LZTS1Q9Y250 596 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 NEU2Q9Y3R4 380 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 PTPRFP10586 1907 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 OPLAHO14841 1288 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 CDH6P55285 790 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 RWDD4Q6NW29 188 aaKnown RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 ANGPTL8Q6UXH0 198 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 CD248Q9HCU0 757 aa12.34□□□□□ -0.43
SYNGAP1-201ENST00000293748 MSH4O15457 936 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 CDH2P19022 906 aaPredicted RBP12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 HSD17B3P37058 310 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 ARHGAP1Q07960 439 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 P3H1Q32P28 736 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC44A4Q53GD3 710 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 FASTKD1Q53R41 847 aaKnown RBP12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 IER5Q5VY09 327 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRAPPC11Q7Z392 1133 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRPV1Q8NER1 839 aa12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 MRPL1Q9BYD6 325 aaKnown RBP12.33□□□□□ -0.43
SYNGAP1-201ENST00000293748 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CLTBP09497 229 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CCDC159P0C7I6 412 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZNF286BP0CG31 522 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 HSPA13P48723 471 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 TBCCQ15814 346 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 LRRC36Q1X8D7 754 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 C10orf88Q9H8K7 445 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 AURKCQ9UQB9 309 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 FRMPD4Q14CM0 1322 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 AP3B1O00203 1094 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 ITGB5P18084 799 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 NFKBIAP25963 317 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CYP3A7-CYP3A51PA0A087WV96 503 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 KIAA0391O15091 583 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 ANGPT2O15123 496 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CYP3A7P24462 503 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 SNX19Q92543 992 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 SEPT3Q9UH03 358 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 NRCAMQ92823 1304 aa12.33□□□□□ -0.44
SYNGAP1-201ENST00000293748 CYP2C9P11712 490 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 MAGEA4P43358 317 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 PRAMEP78395 509 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 STK4Q13043 487 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.442e-7■■■■□ 22.3
SYNGAP1-201ENST00000293748 SLC29A2Q14542 456 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
SYNGAP1-201ENST00000293748 SLC5A5Q92911 643 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms