RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ADGRA1Q86SQ6 560 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 SHCBP1LQ9BZQ2 653 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 TUT1Q9H6E5 874 aaKnown RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 VWA5AO00534 786 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 LONP2Q86WA8 852 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 DTX3LQ8TDB6 740 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 SYTL5Q8TDW5 730 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 PNKPQ96T60 521 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 TSC22D3Q99576 134 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 CNTNAP2Q9UHC6 1331 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 KPNA6O60684 536 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 MAP3K10Q02779 954 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 PGM5Q15124 567 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 RIC8BQ9NVN3 520 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 SOAT2O75908 522 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 CXCL8P10145 99 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 KCNK10P57789 538 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 TIGD7Q6NT04 549 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 LAYNQ6UX15 382 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 METTL7BQ6UX53 244 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 PARP9Q8IXQ6 854 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 ANKS1AQ92625 1134 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 ERP44Q9BS26 406 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 PNMA8BQ9ULN7 279 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 TIMM13Q9Y5L4 95 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 FAM83EQ2M2I3 478 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 HORMAD1Q86X24 394 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 DNERQ8NFT8 737 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 GLIS2Q9BZE0 524 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 STN1Q9H668 368 aaKnown RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
SHANK1-201ENST00000293441 LRRC36Q1X8D7 754 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 ZNF280DQ6N043 979 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 MOXD1Q6UVY6 613 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 HERC6Q8IVU3 1022 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 FAM136AQ96C01 138 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 CIPCQ9C0C6 399 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 IPPQ9Y573 584 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 V9GYQ6 96 aa17.93■□□□□ 0.46
SHANK1-201ENST00000293441 RHOCP08134 193 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 GARTP22102 1010 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 PRUNE1Q86TP1 453 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 AAR2Q9Y312 384 aaKnown RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 MEGF6O75095 1541 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 DSG3P32926 999 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 GEMIN4P57678 1058 aaKnown RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CNGA3Q16281 694 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 KIRREL3Q8IZU9 778 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CACNA2D2Q9NY47 1150 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 PHF20L1A8MW92 1017 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ACADMP11310 421 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CYP11B1P15538 503 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 AKAP5P24588 427 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 SERPINB4P48594 390 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 SLC26A2P50443 739 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 MYL6P60660 151 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ZBTB17Q13105 803 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ERAP2Q6P179 960 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 EPN3Q9H201 632 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 DDX39BQ13838 428 aaKnown RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CCNI2Q6ZMN8 369 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 WDR49Q8IV35 697 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 DDX43Q9NXZ2 648 aaKnown RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 KIAA1257Q9ULG3 409 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 VPS9D1Q9Y2B5 631 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 SMAPO00193 183 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ZBTB39O15060 712 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CAPZA2P47755 286 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 CYGBQ8WWM9 190 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 FOXP3Q9BZS1 431 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 OLFML3Q9NRN5 406 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 TMEM39AQ9NV64 488 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 H2AFY2Q9P0M6 372 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-201ENST00000293441 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
SHANK1-201ENST00000293441 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SHANK1-201ENST00000293441 TP53BP2Q13625 1128 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 TMEM176AQ96HP8 235 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 PLEKHA8Q96JA3 519 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 PPCSQ9HAB8 311 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 KRT16P08779 473 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 INSRRP14616 1297 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 CYP24A1Q07973 514 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 MRNIPQ6NTE8 343 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 ARMC2Q8NEN0 867 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 DNAJC7Q99615 494 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 GTF3C4Q9UKN8 822 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 FZD1Q9UP38 647 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 RPS6KL1Q9Y6S9 549 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 TMEM120BA0PK00 339 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 ALOX15P16050 662 aaPredicted RBP17.91■□□□□ 0.46
SHANK1-201ENST00000293441 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 SAMD3Q8N6K7 520 aa17.91■□□□□ 0.46
SHANK1-201ENST00000293441 ZNF473Q8WTR7 871 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms