RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 SPARCL1Q14515 664 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 ZNF268Q14587 947 aaPredicted RBP20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 TRNP1Q6NT89 227 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 C3orf62Q6ZUJ4 267 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 PCGF5Q86SE9 256 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 TTC13Q8NBP0 860 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 FBXO36Q8NEA4 188 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 ADPGKQ9BRR6 497 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 WDR35Q9P2L0 1181 aa20.9■□□□□ 0.94
SCUBE1-201ENST00000290460 DICER1Q9UPY3 1922 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 GRAP2O75791 330 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 RNF8O76064 485 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 TRUB2O95900 331 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 KRT4P19013 534 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 ARL4CP56559 192 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 GEMIN4P57678 1058 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 BASP1P80723 227 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 R3HDM1Q15032 1099 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 AMHR2Q16671 573 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 SLC10A6Q3KNW5 377 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 BBS9Q3SYG4 887 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 EFHC2Q5JST6 749 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 SPATA18Q8TC71 538 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 DCPSQ96C86 337 aaKnown RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 MCRS1Q96EZ8 462 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 SGIP1Q9BQI5 828 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 PRMT7Q9NVM4 692 aaPredicted RBP20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 PHTF1Q9UMS5 762 aa20.89■□□□□ 0.94
SCUBE1-201ENST00000290460 TYROBPO43914 113 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 RBP3P10745 1247 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 FGFR1P11362 822 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 NQO1P15559 274 aaKnown RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 CYP3A5P20815 502 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 RDXP35241 583 aaKnown RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 IREB2P48200 963 aaKnown RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 SLC26A2P50443 739 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 E2F5Q15329 346 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 CDO1Q16878 200 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 C15orf59Q2T9L4 293 aaPredicted RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 ZC3H18Q86VM9 953 aaKnown RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 GBP7Q8N8V2 638 aaPredicted RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 CMASQ8NFW8 434 aaPredicted RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 FBF1Q8TES7 1133 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 HPDLQ96IR7 371 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 NOD2Q9HC29 1040 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 SLC24A2Q9UI40 661 aa20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 XPO7Q9UIA9 1087 aaKnown RBP20.89■□□□□ 0.93
SCUBE1-201ENST00000290460 SCN1AP35498 2009 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 CFAP73A6NFT4 308 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 APOC4-APOC2K7ER74 178 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 APOC2P02655 101 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 PHKA2P46019 1235 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 GSCP56915 257 aaPredicted RBP20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ATP11CQ8NB49 1132 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 C12orf65Q9H3J6 166 aaKnown RBP20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ERAP1Q9NZ08 941 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 SMG5Q9UPR3 1016 aaKnown RBP20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 AKT3Q9Y243 479 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ARF4P18085 180 aaPredicted RBP20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 GABRB2P47870 512 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 TTLL4Q14679 1199 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 RNF43Q68DV7 783 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ILDR2Q71H61 639 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ERO1BQ86YB8 467 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 KLHL29Q96CT2 875 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 TBC1D31Q96DN5 1066 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 PAFAH2Q99487 392 aa20.88■□□□□ 0.93
SCUBE1-201ENST00000290460 ZSWIM8A7E2V4 1837 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 GOLGA8RI6L899 631 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 MCF2LO15068 1137 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 NDST1P52848 882 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 CDH6P55285 790 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 CYP4V2Q6ZWL3 525 aaPredicted RBP20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 C12orf29Q8N999 325 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 KLF6Q99612 283 aaPredicted RBP20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 PLCD4Q9BRC7 762 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 SENP1Q9P0U3 644 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 ZMYND8Q9ULU4 1186 aaPredicted RBP20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 CHMP2BQ9UQN3 213 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 E5RJQ4 531 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 ZNF286BP0CG31 522 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 MCF2P10911 925 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 PDK4Q16654 411 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 LVRNQ6Q4G3 990 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 IGDCC3Q8IVU1 814 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 GRAMD1AQ96CP6 724 aa20.87■□□□□ 0.93
SCUBE1-201ENST00000290460 NDC80O14777 642 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 MAGEB2O15479 319 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 LGALS2P05162 132 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 KRT16P08779 473 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 PHBP35232 272 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 ZNF143P52747 638 aaPredicted RBP20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 ACVR2BQ13705 512 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 TTLL12Q14166 644 aaPredicted RBP20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 DPYSL3Q14195 570 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 TMEM132DQ14C87 1099 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 HHATQ5VTY9 493 aa20.86■□□□□ 0.93
SCUBE1-201ENST00000290460 OR6B2Q6IFH4 312 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms