RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ECI2O75521 394 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 BEST1O76090 585 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 KRT13P13646 458 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GJA1P17302 382 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 BDNFP23560 247 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 ALDH1A3P47895 512 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 NDST1P52848 882 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 EPHB3P54753 998 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 TNNC1P63316 161 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 NOP14P78316 857 aaKnown RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 SIGLEC14Q08ET2 396 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 PLD1Q13393 1074 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 STIM1Q13586 685 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 TEAD2Q15562 447 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 STXBP5Q5T5C0 1151 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 SDHAF4Q5VUM1 108 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 KLHL10Q6JEL2 608 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GET4Q7L5D6 327 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 UBALD2Q8IYN6 164 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 C12orf29Q8N999 325 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 ST13P5Q8NFI4 369 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 OR6B3Q8NGW1 331 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GIPC2Q8TF65 315 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 MCRS1Q96EZ8 462 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GBP4Q96PP9 640 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 HNRNPABQ99729 332 aaKnown RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 SLC46A2Q9BY10 475 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 ELOVL4Q9GZR5 314 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 NUP62CLQ9H1M0 184 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 HSD3B7Q9H2F3 369 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 SLC2A4RGQ9NR83 387 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 ABI2Q9NYB9 513 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 GCNT4Q9P109 453 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 CNTN6Q9UQ52 1028 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 CTNND2Q9UQB3 1225 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 NUMBLQ9Y6R0 609 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 COL4A2P08572 1712 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 KIF26AQ9ULI4 1882 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-201ENST00000288344 MUC6Q6W4X9 2439 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 SLC38A8A6NNN8 435 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 A8MXQ7 604 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 PRR33A8MZF0 331 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-201ENST00000288344 CLDN5O00501 218 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 GNA14O95837 355 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ZDHHC11BP0C7U3 371 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 GBP2P32456 591 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ABL2P42684 1182 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 MXI1P50539 228 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 RAD23BP54727 409 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 GPC5P78333 572 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ZXDBP98169 803 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 MAPRE1Q15691 268 aaKnown RBP9.75□□□□□ -0.85
HMGN1-201ENST00000288344 MGAT5BQ3V5L5 792 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 MDH1BQ5I0G3 518 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 CYP4A22Q5TCH4 519 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 SNX30Q5VWJ9 437 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 IQCEQ6IPM2 695 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 HFE2Q6ZVN8 426 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ACOT1Q86TX2 421 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 STKLD1Q8NE28 680 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 RIN3Q8TB24 985 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ING5Q8WYH8 240 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ELSPBP1Q96BH3 223 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 KCNK16Q96T55 309 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 SMOQ99835 787 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 FUCA2Q9BTY2 467 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 DDX23Q9BUQ8 820 aaKnown RBP9.75□□□□□ -0.85
HMGN1-201ENST00000288344 C1QTNF1Q9BXJ1 281 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF518BQ9C0D4 1074 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 GPR88Q9GZN0 384 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 NIF3L1Q9GZT8 377 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 TRPV5Q9NQA5 729 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 ASAH2Q9NR71 780 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 WNT16Q9UBV4 365 aa9.75□□□□□ -0.85
HMGN1-201ENST00000288344 KRBA1A5PL33 1030 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 LRRC10BA6NIK2 292 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 STX10O60499 249 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 PDGFBP01127 241 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 CSH1P0DML2 217 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 CSH2P0DML3 217 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 SRFP11831 508 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 GABRR2P28476 465 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 PIK3CAP42336 1068 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 PGFP49763 221 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 RPL10AP62906 217 aaKnown RBP9.74□□□□□ -0.85
HMGN1-201ENST00000288344 FCHO2Q0JRZ9 810 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 FZD5Q13467 585 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 NCAPHQ15003 741 aa9.74□□□□□ -0.85
HMGN1-201ENST00000288344 PKDCCQ504Y2 493 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms