RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 VAMP7P51809 220 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
PDE6D-201ENST00000287600 SRSF5Q13243 272 aaKnown RBP16.27■□□□□ 0.2
PDE6D-201ENST00000287600 CCINQ13939 588 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 INTS8Q75QN2 995 aaKnown RBP16.27■□□□□ 0.2
PDE6D-201ENST00000287600 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 MAB21L3Q8N8X9 362 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 STKLD1Q8NE28 680 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 DHTKD1Q96HY7 919 aaPredicted RBP16.27■□□□□ 0.2
PDE6D-201ENST00000287600 PI4K2AQ9BTU6 479 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 TMLHEQ9NVH6 421 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 L1RE1Q9UN81 338 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
PDE6D-201ENST00000287600 FRYLO94915 3013 aa16.27■□□□□ 0.2
PDE6D-201ENST00000287600 TRIM49BA6NDI0 452 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 C4BPAP04003 597 aaKnown RBP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 DDX6P26196 483 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 CNR2P34972 360 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 PPP1R2P41236 205 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 NLRP12P59046 1061 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 MYL6P60660 151 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 MYL7Q01449 175 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 TDRD10Q5VZ19 366 aaKnown RBP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 CEP68Q76N32 757 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 SYNPOQ8N3V7 929 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 RTKNQ9BST9 563 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 C2orf42Q9NWW7 574 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 CCL26Q9Y258 94 aa16.26■□□□□ 0.19
PDE6D-201ENST00000287600 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
PDE6D-201ENST00000287600 GOLGA6L22H0YM25 854 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 IKBKBO14920 756 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 HRO43593 1189 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 LRP3O75074 770 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 CLSTN1O94985 981 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 F11P03951 625 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TRIM49P0CI25 452 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TRIM49CP0CI26 452 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 CSH1P0DML2 217 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 CSH2P0DML3 217 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 HMGA1P17096 107 aaKnown RBP16.25■□□□□ 0.19
PDE6D-201ENST00000287600 ACAT1P24752 427 aaKnown RBP16.25■□□□□ 0.19
PDE6D-201ENST00000287600 FKBP3Q00688 224 aaKnown RBP16.25■□□□□ 0.19
PDE6D-201ENST00000287600 SOWAHAQ2M3V2 549 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 WDR72Q3MJ13 1102 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 C1orf220Q5T0J3 134 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 SDHAF4Q5VUM1 108 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TXNDC8Q6A555 127 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 DPH6Q7L8W6 267 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TMEM150AQ86TG1 271 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 ADGRF2Q8IZF7 708 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 USP13Q92995 863 aaPredicted RBP16.25■□□□□ 0.19
PDE6D-201ENST00000287600 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
PDE6D-201ENST00000287600 DDX43Q9NXZ2 648 aaKnown RBP16.25■□□□□ 0.19
PDE6D-201ENST00000287600 WDR87Q6ZQQ6 2873 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 DCDC2BA2VCK2 349 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 EPB41P11171 864 aaKnown RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 ATICP31939 592 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 GCLMP48507 274 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 RPL10AP62906 217 aaKnown RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 TNNC1P63316 161 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 GRSF1Q12849 480 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 RUNX3Q13761 415 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 NCOA4Q13772 614 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 DDR2Q16832 855 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 ZACNQ401N2 412 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 INTS6LQ5JSJ4 861 aaKnown RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 CC2D1AQ6P1N0 951 aaPredicted RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 SV2AQ7L0J3 742 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 OSTM1Q86WC4 334 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 TTC16Q8NEE8 873 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 NETO1Q8TDF5 533 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 NELFBQ8WX92 580 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 SYAP1Q96A49 352 aaPredicted RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 FAM83CQ9BQN1 747 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 XYLT2Q9H1B5 865 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 MMRN2Q9H8L6 949 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 TRPC7Q9HCX4 862 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 SEMA4GQ9NTN9 838 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 TDP1Q9NUW8 608 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 UXTQ9UBK9 157 aaPredicted RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
PDE6D-201ENST00000287600 RALGAPA1Q6GYQ0 2036 aa16.24■□□□□ 0.19
PDE6D-201ENST00000287600 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
PDE6D-201ENST00000287600 VNN1O95497 513 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms