RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 OOSP2Q86WS3 158 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 C4orf33Q8N1A6 199 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 YIPF2Q9BWQ6 316 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 FAF1Q9UNN5 650 aaPredicted RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 BEX3Q00994 111 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 CERS5Q8N5B7 392 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 ING2Q9H160 280 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 RANBP17Q9H2T7 1088 aaKnown RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 FBXO44Q9H4M3 255 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 RAD51CO43502 376 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 RHOCP08134 193 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 PLEKP08567 350 aaPredicted RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 COILP38432 576 aaPredicted RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 RAP1GAPP47736 663 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 FNTAP49354 379 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 CXCL17Q6UXB2 119 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 CARNMT1Q8N4J0 409 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 APOL5Q9BWW9 433 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 AAR2Q9Y312 384 aaKnown RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 SPDYE5A6NIY4 337 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 H0Y3Z8 333 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 LMNAP02545 664 aaKnown RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 AMHP03971 560 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 RPSAP08865 295 aaKnown RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 KLRC2P26717 231 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 SPDYE7PQ495Y7 208 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 SGSM3Q96HU1 749 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 TLR8Q9NR97 1041 aaKnown RBP19.25■□□□□ 0.67
PCDH1-201ENST00000287008 PSD3Q9NYI0 1048 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 PLA2G4CQ9UP65 541 aa19.25■□□□□ 0.67
PCDH1-201ENST00000287008 SUPT3HB4E1H0 165 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 MAP3K6O95382 1288 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 LONRF1Q17RB8 773 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 TRIM48Q8IWZ4 208 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 SMARCAL1Q9NZC9 954 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 SLC15A5A6NIM6 579 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 UBA1P22314 1058 aaKnown RBP19.24■□□□□ 0.67
PCDH1-201ENST00000287008 FKBP1BP68106 108 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 RXFP2Q8WXD0 754 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 WDR18Q9BV38 432 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 EMILIN2Q9BXX0 1053 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 FRMD8P1Q9BZ68 369 aaPredicted RBP19.24■□□□□ 0.67
PCDH1-201ENST00000287008 ETNK1Q9HBU6 452 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 AP4E1Q9UPM8 1137 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 RPS6KL1Q9Y6S9 549 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 FAXCQ5TGI0 409 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 SLC39A10Q9ULF5 831 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 MYL2P10916 166 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
PCDH1-201ENST00000287008 GRID1Q9ULK0 1009 aa19.24■□□□□ 0.67
PCDH1-201ENST00000287008 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 WTIPA6NIX2 430 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 CYTH3O43739 400 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 TGM2P21980 687 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 PKN3Q6P5Z2 889 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 PTF1AQ7RTS3 328 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 BRSK2Q8IWQ3 736 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 FAM161BQ96MY7 647 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 CDK5RAP1Q96SZ6 601 aaKnown RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 ADAM2Q99965 735 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 IQGAP1P46940 1657 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 F8VZ95 297 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 TFDP3Q5H9I0 405 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 AARS2Q5JTZ9 985 aaKnown RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 UNC45BQ8IWX7 931 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 ZNF507Q8TCN5 953 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 RIN2Q8WYP3 895 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 SCOCQ9UIL1 159 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 NFASCO94856 1347 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 CCNI2Q6ZMN8 369 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 SNX31Q8N9S9 440 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 NAT9Q9BTE0 207 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 CYP39A1Q9NYL5 469 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 ENDOD1O94919 500 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 CYP3A4P08684 503 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 RHOAP61586 193 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 GRIK5Q16478 980 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 RETSATQ6NUM9 610 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 EMC1Q8N766 993 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 TRIML2Q8N7C3 387 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 SENP6Q9GZR1 1112 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-201ENST00000287008 GPATCH2LQ9NWQ4 482 aa19.23■□□□□ 0.67
PCDH1-201ENST00000287008 FRMPD4Q14CM0 1322 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 MYPNQ86TC9 1320 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 CNTNAP2Q9UHC6 1331 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 MAP2P11137 1827 aaKnown RBP19.22■□□□□ 0.67
PCDH1-201ENST00000287008 ACAT1P24752 427 aaKnown RBP19.22■□□□□ 0.67
PCDH1-201ENST00000287008 CCR1P32246 355 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 NDST1P52848 882 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 ZNF284Q2VY69 593 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 TMEM150BA6NC51 233 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 FAM47DPA6NHR8 397 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 PPP3CCP48454 512 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 SERPINB4P48594 390 aa19.22■□□□□ 0.67
PCDH1-201ENST00000287008 IKBKEQ14164 716 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms