RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PIGZQ86VD9 579 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 RHOT2Q8IXI1 618 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 IPO4Q8TEX9 1081 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 MIS12Q9H081 205 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 TMEM30AQ9NV96 361 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ABI2Q9NYB9 513 aaPredicted RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 TJP2Q9UDY2 1190 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 SSX2IPQ9Y2D8 614 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 YBX2Q9Y2T7 364 aaKnown RBP19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 PCDHB5Q9Y5E4 795 aa19.95■□□□□ 0.78
PDLIM3-202ENST00000284770 ADAM12O43184 909 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 LILRB3O75022 631 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 RPL17P18621 184 aaKnown RBP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 OR1D2P34982 312 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 ACADSBP45954 432 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 GSCP56915 257 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 CYP4A22Q5TCH4 519 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 ZMIZ2Q8NF64 920 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 C2orf15Q8WU43 125 aaKnown RBP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 KCTD13Q8WZ19 329 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 SAMD11Q96NU1 681 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 KCNK16Q96T55 309 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 ABCB6Q9NP58 842 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 ALG13Q9NP73 1137 aaKnown RBP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 DMAP1Q9NPF5 467 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 CTTNBP2NLQ9P2B4 639 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 WDR35Q9P2L0 1181 aa19.94■□□□□ 0.78
PDLIM3-202ENST00000284770 E5RJQ4 531 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 BUB1O43683 1085 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 GABBR2O75899 941 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 CYP2F1P24903 491 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 DNAJB2P25686 324 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PBX2P40425 430 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 NOP2P46087 812 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 NAP1L1P55209 391 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 ROR1Q01973 937 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 CREMQ03060 361 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 ZNF268Q14587 947 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PLEKHA7Q6IQ23 1121 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 VSTM1Q6UX27 236 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 RNF19BQ6ZMZ0 732 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 SPRED2Q7Z698 418 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PHLDB2Q86SQ0 1253 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 XYLT1Q86Y38 959 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 TRIM58Q8NG06 486 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PGLYRP2Q96PD5 576 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 TGS1Q96RS0 853 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PBX4Q9BYU1 374 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 OSGEPQ9NPF4 335 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PARVAQ9NVD7 372 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 UVRAGQ9P2Y5 699 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 CHORDC1Q9UHD1 332 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 LAMA2P24043 3122 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 WDR27A2RRH5 827 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 MTMR11A4FU01 709 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 TAP1Q03518 808 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 UBE3AQ05086 875 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 MAMLD1Q13495 774 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 LLGL2Q6P1M3 1020 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 ATAD1Q8NBU5 361 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 C3orf20Q8ND61 904 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 SPPL3Q8TCT6 385 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 SPPL2BQ8TCT7 592 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 AUTS2Q8WXX7 1259 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 C11orf84Q9BUA3 381 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 NUP85Q9BW27 656 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 MRPL47Q9HD33 250 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 FNIP2Q9P278 1114 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 MTUS1Q9ULD2 1270 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 COG5Q9UP83 839 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 PCDHGC5Q9Y5F6 944 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 SCINQ9Y6U3 715 aa19.93■□□□□ 0.78
PDLIM3-202ENST00000284770 TCRBV5S1A1TA0A578 114 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 MTA2O94776 668 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 GRIK1P39086 918 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 MAGEA11P43364 429 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 HADHBP55084 474 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 ERVK-21P61565 698 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 IFI16Q16666 785 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 TMC7Q7Z402 723 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 TDHQ8IZJ6 230 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 CALR3Q96L12 384 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 RXFP1Q9HBX9 757 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 PNPLA8Q9NP80 782 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 MSRAQ9UJ68 235 aa19.92■□□□□ 0.78
PDLIM3-202ENST00000284770 NLRC5Q86WI3 1866 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 HHLA1C9JL84 531 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 PIK3R2O00459 728 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 ABLIM3O94929 683 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 VNN2O95498 520 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 RAB30Q15771 203 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 ZDHHC17Q8IUH5 632 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 SCUBE3Q8IX30 993 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 ZNF461Q8TAF7 563 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 ZNF564Q8TBZ8 553 aaPredicted RBP19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 POF1BQ8WVV4 589 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 MCRS1Q96EZ8 462 aa19.91■□□□□ 0.78
PDLIM3-202ENST00000284770 NAPGQ99747 312 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms